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AT1G53710.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Calcineurin-like metallo-phosphoesterase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); Has 794 Blast hits to 778 proteins in 180 species: Archae - 3; Bacteria - 28; Metazoa - 240; Fungi - 249; Plants - 248; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ZM57eggNOG:KOG3662EMBL:CP002684EnsemblPlants:AT1G53710
EnsemblPlants:AT1G53710.1entrez:841809ExpressionAtlas:A8MQN4Gene3D:3.60.21.10
GeneID:841809GO:GO:0005768GO:GO:0005794GO:GO:0005802
GO:GO:0016021GO:GO:0016787Gramene:AT1G53710.1hmmpanther:PTHR13315
hmmpanther:PTHR13315:SF0HOGENOM:HOG000015126InParanoid:A8MQN4InterPro:IPR004843
InterPro:IPR029052InterPro:IPR033308OMA:GEMFAFWPANTHER:PTHR13315
PaxDb:A8MQN4Pfam:PF00149PhylomeDB:A8MQN4PRIDE:A8MQN4
ProteinModelPortal:A8MQN4Proteomes:UP000006548RefSeq:NP_175775.2STRING:3702.AT1G53710.1
SUPFAM:SSF56300TAIR:AT1G53710TMHMM:TMhelixUniGene:At.37351
UniGene:At.68768UniProt:A8MQN4
Coordinates (TAIR10) chr1:-:20053339..20056271
Molecular Weight (calculated) 60034.30 Da
IEP (calculated) 7.53
GRAVY (calculated) -0.18
Length 528 amino acids
Sequence (TAIR10)
(BLAST)
001: MKHHHKLTVA LCLIWAATIL YGEMFAFWVP SLFTCSWPHH KSDGVESDGN FTKVAIVTDP QLMDKTSFRL SSKTLALELA QFYTDINMRR SFFRSVLPFK
101: PDVVLFLGDY FDGGPFLSEE EWQESLNRLK HVFGLNSEGR VGDIPTFYIP GNHDIGYSRV ASHKQGVIDR YEKVFGVRNR RFMIGNVEFI SIDAQAIDGN
201: SKKDLASEVW KFVQNVSTDA QSHPRVLLTH IPLYRPDQTP CGPHRGSSVI DQRFWRHSQD QEVIYQNYIT PESSTKLLEL IKPILVLSGH DHDQCTVIHK
301: SKAGSVTEHT LGTVSWQQGN IHPSFMLLSV PKAFHRNSSD PDKMLHTQLC FLPSQLFIYM WYLSLFVMSL LALLLWPNHG ISFLNNAADC ISNVMKSSFL
401: SSVTKEKNED ENCEYEMVWD AEGSMHLVKK ALQTPVKRQS DKPLVEKGNA VMRSAARKNA SEQIELVMDS DVNASAGGSD PLMRSASKSR TKLVIQRVIR
501: TIMMVIVIAA LNVPIYMMLL FKDWIEQE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)