AT3G62370.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.542 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : heme binding | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
heme binding; FUNCTIONS IN: heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c-552/DMSO reductase-like, haem-binding domain (InterPro:IPR019020); Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:23080789..23083234 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39854.20 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.45 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||
| Length | 361 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLQLVVVAWL LIFTAETVVP HQESGEWSCE SDSEIQVLAD FRPGIITLDG HNDDWKDIDG SEFPLRPALD PDSDHEYDAG KMTVKALHDG RDIYFLLEID 101: GNYAYDKGEN NKCPSVALMF QIGDQATYHN MGGCKEGTDS CTSKACRGFE VDIMHFSIGN AIPGRLYGGN PIDNGEGNGG DRFGHLVDIY AWNPHCRYLD 201: GLGPSGNDSS AQNDWHGAWW HSSFTTLSGY VEEDSPYTPD GKKGTYYFEF SRPLRTMDRL QQDVQFTLGS PAKMSVAFWY PVDSKPWHGS GHYTINCDWT 301: PLDISSGSSS GLTASTVKGS SDGASITAIL LSMISLVFSG FIAYRLFSPR NVPFTPMENN L |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)