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AT3G51550.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
AmiGO : plasma membrane 17673660
SwissProt : plasma membrane 16381842
TAIR : plasma membrane 17317660
TAIR : plasma membrane 17673660
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:26748395 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:23990937 (2013): plasma membrane
  • PMID:22923678 (2012): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16635983 (2006): plasma membrane
  • PMID:16618929 (2006): plasma membrane
  • PMID:15574830 (2004): plasma membrane
  • PMID:15308754 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Malectin/receptor-like protein kinase family protein
Curator
Summary (TAIR10)
Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception.
Computational
Description (TAIR10)
FERONIA (FER); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: pollen tube reception, post-embryonic development, protein amino acid autophosphorylation; LOCATED IN: filiform apparatus, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT3G04690.1); Has 113642 Blast hits to 112400 proteins in 4384 species: Archae - 101; Bacteria - 12955; Metazoa - 42231; Fungi - 9220; Plants - 32542; Viruses - 402; Other Eukaryotes - 16191 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G51550-MONOMERBioGrid:9636DIP:DIP-59394NEC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187EMBL:AJ242671
EMBL:AK230000EMBL:AL133452EMBL:AY035053EMBL:CP002686EMBL:EF681137EnsemblPlants:AT3G51550EnsemblPlants:AT3G51550.1
entrez:824318Gene3D:2.60.120.200GeneID:824318Genevisible:Q9SCZ4GO:GO:0004672GO:GO:0004674GO:GO:0005524
GO:GO:0005622GO:GO:0005886GO:GO:0007338GO:GO:0009506GO:GO:0009723GO:GO:0009738GO:GO:0009741
GO:GO:0009742GO:GO:0009788GO:GO:0009791GO:GO:0009873GO:GO:0010483GO:GO:0016020GO:GO:0016021
GO:GO:0030308GO:GO:0043680GO:GO:0046777GO:GO:0048364GO:GO:0050832Gramene:AT3G51550.1hmmpanther:PTHR27003
hmmpanther:PTHR27003:SF53HOGENOM:HOG000238317InParanoid:Q9SCZ4InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441InterPro:IPR024788iPTMnet:Q9SCZ4KEGG:ath:AT3G51550OMA:LTWMLQVPaxDb:Q9SCZ4
Pfam:PF07714Pfam:PF12819Pfam:Q9SCZ4Pfscan:PS50011PhylomeDB:Q9SCZ4PIR:T45786PRIDE:Q9SCZ4
PRO:PR:Q9SCZ4PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9SCZ4Proteomes:UP000006548RefSeq:NP_190723.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9SCZ4STRING:3702.AT3G51550.1SUPFAM:SSF56112SwissPalm:Q9SCZ4
TAIR:AT3G51550tair10-symbols:FERTMHMM:TMhelixUniGene:At.656UniProt:Q9SCZ4
Coordinates (TAIR10) chr3:-:19117877..19120564
Molecular Weight (calculated) 98155.10 Da
IEP (calculated) 6.11
GRAVY (calculated) -0.26
Length 895 amino acids
Sequence (TAIR10)
(BLAST)
001: MKITEGRFRL SLLLLLLLIS AATLISAADY SPTEKILLNC GGGASNLTDT DNRIWISDVK SKFLSSSSED SKTSPALTQD PSVPEVPYMT ARVFRSPFTY
101: TFPVASGRKF VRLYFYPNSY DGLNATNSLF SVSFGPYTLL KNFSASQTAE ALTYAFIIKE FVVNVEGGTL NMTFTPESAP SNAYAFVNGI EVTSMPDMYS
201: STDGTLTMVG SSGSVTIDNS TALENVYRLN VGGNDISPSA DTGLYRSWYD DQPYIFGAGL GIPETADPNM TIKYPTGTPT YVAPVDVYST ARSMGPTAQI
301: NLNYNLTWIF SIDSGFTYLV RLHFCEVSSN ITKINQRVFT IYLNNQTAEP EADVIAWTSS NGVPFHKDYV VNPPEGNGQQ DLWLALHPNP VNKPEYYDSL
401: LNGVEIFKMN TSDGNLAGTN PIPGPQVTAD PSKVLRPTTR KSKSNTAIIA GAASGAVVLA LIIGFCVFGA YRRRKRGDYQ PASDATSGWL PLSLYGNSHS
501: AGSAKTNTTG SYASSLPSNL CRHFSFAEIK AATKNFDESR VLGVGGFGKV YRGEIDGGTT KVAIKRGNPM SEQGVHEFQT EIEMLSKLRH RHLVSLIGYC
601: EENCEMILVY DYMAHGTMRE HLYKTQNPSL PWKQRLEICI GAARGLHYLH TGAKHTIIHR DVKTTNILLD EKWVAKVSDF GLSKTGPTLD HTHVSTVVKG
701: SFGYLDPEYF RRQQLTEKSD VYSFGVVLFE ALCARPALNP TLAKEQVSLA EWAPYCYKKG MLDQIVDPYL KGKITPECFK KFAETAMKCV LDQGIERPSM
801: GDVLWNLEFA LQLQESAEEN GKGVCGDMDM DEIKYDDGNC KGKNDKSSDV YEGNVTDSRS SGIDMSIGGR SLASEDSDGL TPSAVFSQIM NPKGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)