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AT3G27325.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:21433285 (2011): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : hydrolases, acting on ester bonds
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
hydrolases, acting on ester bonds; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 338 Blast hits to 334 proteins in 168 species: Archae - 0; Bacteria - 16; Metazoa - 103; Fungi - 147; Plants - 45; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410YD9NeggNOG:KOG3724EMBL:CP002686EnsemblPlants:AT3G27325EnsemblPlants:AT3G27325.1entrez:822352ExpressionAtlas:F4IWG3
Gene3D:3.40.50.1820GeneID:822352GO:GO:0005622GO:GO:0006505GO:GO:0006886GO:GO:0016021GO:GO:0016788
Gramene:AT3G27325.1hmmpanther:PTHR15495hmmpanther:PTHR15495:SF7InterPro:IPR012908InterPro:IPR029058iPTMnet:F4IWG3PaxDb:F4IWG3
Pfam:PF07819PRIDE:F4IWG3ProteinModelPortal:F4IWG3Proteomes:UP000006548RefSeq:NP_189368.5STRING:3702.AT3G27325.2SUPFAM:SSF53474
TAIR:AT3G27325TMHMM:TMhelixUniGene:At.37082UniProt:F4IWG3
Coordinates (TAIR10) chr3:+:10096224..10102087
Molecular Weight (calculated) 120382.00 Da
IEP (calculated) 8.27
GRAVY (calculated) 0.09
Length 1085 amino acids
Sequence (TAIR10)
(BLAST)
0001: MRDVRFAMSI RPRLRIVGVL ILAAWIGLVA LFGLLKPIKN GCTMTYMYPT YIPISVTDDT TPGRYGLYLY HEGWRKIDFK EHLKKLSGVP VLFIPGNAGS
0101: YKQVRSVAAE SDRAFQGGPF ERTFYQEASL LRGGGADTES VDYDLPSQYS NRLDWFAVDL EGEHSAMDGR ILEEHTEYVV YAIHRILDQY KESHDTRERE
0201: GAAASSKLPH DVILVGHSMG GFVARAAAVH PRLRKSAVQT ILTLSSPHQS PPLALQPSLG HYFAQVNREW KKGYEVQTSP GGNYVSDPLL SGVVVVSISG
0301: GYNDYQVRSK LESLDGIVPS SHGFMISSTS MTNVWLSMEH QAILWCNQLV VQVSHTLLSM VDSKTNQPFS DTDKRLWVLT RMLQSALAQS FNGMTPMEVS
0401: HELPILASKG STCFLDWRDD ALDRDLYIQT STVTILAMDG RRRWLDIDLL GSNGKNHFIF VTNLVPCSGV RLHLWPEKEK SNSNLPVCER VLEVTSKMVL
0501: IPAGPAPKQS EPGSQTEQAP PSAVLKLGPE DMRGFRFLTI SVAPREAVSG KPPVAVSMAV GQFFNPGDGA VEVSSQSMLL STYWAKEIFL KEDHPLAYNL
0601: SFSTSLGLLP ATLSLKTTGC GIKTFGLPDG ETGDLDKDKL CKLRCFPPVA LAWDSASGLH VFANLYSETI VIDSSPALWS SQSSEKTTVM LLVDPHCSYT
0701: ASVHVSAPAM SSRFVLLYGP QIVGFSFAVI MFALMRQANQ WDNKLSVPPL LSAVEYNLEM PSPFLLLAVL PLISSLFYSF LMGQPIPPLT SFTVVSLICY
0801: LLANAFISVL TIVSKFPFQA SALVHTTVKS RCQALERNYS LAFLHWFSIL SSSFFCLKAI RILKLNTTIL MTLIAVTLVS FVHPALGLFV LLASHALCCH
0901: NSMCCIMMAS KRKESLDQKN EAERKTRHPS SREDPVSGDL SEKSFVETQA DIFNHRHGLL ILHLLAALMF VPSLAAWFQR IGTGQSFPWF ADSALCVGVI
1001: FHGILNSRPE SSILRSFPFF SGHQIRPHHI YLLAGYYCFF SGLELAPYKV FYAIASLGYI SLTLKISQVN KNDLRFRTKS RIHRN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)