AT3G01720.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.640 What is SUBAcon? |
|
||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 374 Blast hits to 211 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:-:262412..265608 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 91454.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.27 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.41 | ||||||||||||||||||||||||||||
| Length | 802 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRWDLITAIV AALVVSVLAD ESGQMAPYRI HTLFSVECQN YFDWQTVGLM HSFLKSGQPG PITRLLSCTD DQKKTYRGMN LAPTFEVPSW SRHPKTGDWY 101: PAINKPVGVL YWLQHSEEAK HVDWVVILDA DMIIRGPIIP WELGAERGRP FAAHYGYLVG CDNLLVRLHT KHPELCDKVG GLLAMHIDDL RVLAPLWLSK 201: TEDVRQDTAH WTTNLTGDIY GKGWISEMYG YSFGAAEAGL KHKINDDLMI YPGYVPREGV EPVLMHYGLP FSIGNWSFTK LDHHEDNIVY DCNRLFPEPP 301: YPREVKIMEP DPSKRRGLIL SLECMNTLNE GLILRHAENG CPKPKWTKYL SFLKSKTFME LTRPKLLAPG SVHILPDQHE PPPIDEFKGT YPKIHTLFST 401: ECTTYFDWQT VGFMHSFRQS GQPGNITRLL SCTDEALKNY KGHDLAPTHY VPSMSRHPLT GDWYPAINKP AAVVHWLHHT NIDAEYVVIL DADMILRGPI 501: TPWEFKAARG RPVSTPYDYL IGCDNDLARL HTRNPEACDK VGGVIIMHIE DLRKFAMYWL LKTQEVRADK EHYGKELTGD IYESGWISEM YGYSFGAAEL 601: NLRHSINKEI MIYPGYVPEP GADYRVFHYG LEFKVGNWSF DKANWRNTDL INKCWAKFPD PPSPSAVHQT DNDLRQRDLL SIECGQKLNE ALFLHHKRRN 701: CPEPGSESTE KISVSRKVGN IETKQTQGSD ETKESSGSSE SEGRFSTLKL WVIALWLISG VGFLVVMLLV FSTRRGRGTT RGKGYRNKRR TSYSNTGFLD 801: TK |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)