suba logo
AT5G09890.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
golgi 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:18433157 (2008): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT4G14350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G09890-MONOMERBioCyc:ARA:GQT-1083-MONOMEReggNOG:ENOG410XQC0eggNOG:KOG0605
EMBL:AB047278EMBL:AY034932EMBL:AY059113EMBL:CP002688
EnsemblPlants:AT5G09890EnsemblPlants:AT5G09890.1entrez:830849ExpressionAtlas:Q93V54
GeneID:830849GO:GO:0004674GO:GO:0005524Gramene:AT5G09890.1
hmmpanther:PTHR24356hmmpanther:PTHR24356:SF195InterPro:IPR000719InterPro:IPR000961
InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441InterPro:IPR017892
ncoils:CoilPfam:PF00069Pfam:PF00433Pfscan:PS50011
Pfscan:PS51285PhylomeDB:Q93V54PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011PROSITE:PS51285Proteomes:UP000006548RefSeq:NP_568221.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00133SMART:SM00220
SMR:Q93V54STRING:3702.AT5G09890.2SUPFAM:SSF56112TAIR:AT5G09890
UniGene:At.6947UniProt:Q93V54
Coordinates (TAIR10) chr5:-:3085810..3088842
Molecular Weight (calculated) 59255.90 Da
IEP (calculated) 5.61
GRAVY (calculated) -0.59
Length 515 amino acids
Sequence (TAIR10)
(BLAST)
001: MDGADGTVRV KPGRGFETET DVAVSSPVTR QKAAAAKQFI ENHYKNYLQG LHERMERRRE FQRKVQEAQL PVEEQDEMMR NLARRETEYM RLQRRKIGID
101: DFELLTVIGK GAFGEVRLCR LRSTSEVYAM KKLKKTEMLS RGQVEHVRSE RNLLAEVDSR YIVKLFYSFQ DSECLYLIME YLPGGDIMTL LMREDILSED
201: VARFYIAESI LAIHSIHQHN YVHRDIKPDN LILDKSGHLK LSDFGLCKPL DDKYSSLLLE DDEMLSQDSE NQSGKSDADK APWQMPKEQL LQWKRNRRAL
301: AYSTVGTLDY MAPEVLLKKG YGMECDWWSL GAILYEMLVG YPPFCSDDPR ITCRKIINWR VCLKFPEEPK ISDEARDLIC RLLCDVDSRL GTRGVEEIKS
401: HPWFKGTPWD KLYDMEAAYR PIVDGELDTQ NFEKFPEVEG SPSEAPQVGP WRKMLTSKDT NFIGFTFKKS DITRSMESSG ADMKSNGSGE APSLISLLGR
501: INMEEGEGGE LNHKT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)