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AT2G36900.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : membrin 11
Curator
Summary (TAIR10)
member of Membrin Gene Family
Computational
Description (TAIR10)
membrin 11 (MEMB11); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, cellular membrane fusion; LOCATED IN: endoplasmic reticulum membrane, Golgi membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: membrin 12 (TAIR:AT5G50440.1); Has 489 Blast hits to 489 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 100; Plants - 135; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
Protein Annotations
BioGrid:3608eggNOG:ENOG4111M37eggNOG:KOG3251EMBL:AC006922EMBL:AY063816EMBL:AY086341EMBL:AY091350
EMBL:CP002685EnsemblPlants:AT2G36900EnsemblPlants:AT2G36900.1entrez:818264ExpressionAtlas:Q9SJL6GeneID:818264Genevisible:Q9SJL6
GO:GO:0000139GO:GO:0000149GO:GO:0005484GO:GO:0015031GO:GO:0016021GO:GO:0061025hmmpanther:PTHR21230
hmmpanther:PTHR21230:SF1HOGENOM:HOG000264938InParanoid:Q9SJL6IntAct:Q9SJL6InterPro:IPR027027PaxDb:Q9SJL6Pfam:PF12352
Pfam:Q9SJL6PhylomeDB:Q9SJL6PIR:A84786PIRSF:PIRSF028865PRIDE:Q9SJL6PRO:PR:Q9SJL6ProteinModelPortal:Q9SJL6
Proteomes:UP000006548Reactome:R-ATH-204005Reactome:R-ATH-5694530Reactome:R-ATH-6807878RefSeq:NP_181227.1SMR:Q9SJL6STRING:3702.AT2G36900.1
SUPFAM:SSF58038TAIR:AT2G36900tair10-symbols:ATMEMB11tair10-symbols:MEMB11TMHMM:TMhelixUniGene:At.27189UniProt:Q9SJL6
Coordinates (TAIR10) chr2:-:15491615..15492587
Molecular Weight (calculated) 25629.80 Da
IEP (calculated) 10.05
GRAVY (calculated) -0.44
Length 225 amino acids
Sequence (TAIR10)
(BLAST)
001: MASGIVEGGG SLSDVYSSAK RILLKARDGI ERLERFESSS MDSPDLASSV KRDITEVRSL CSNMDTLWRS IPVKSQRDLW RRKTEQVGEE AEYLNLSLEK
101: YMSRNQRKML EAKERADLLG RASGEGAHIL QIFDEEAQAM SSVKNSKRML EESFSSGVAI LSKYAEQRDR LKSAQRKALD VLNTVGLSNS VLRLIERRNR
201: VDTWIKYAGM IATLVILYLF IRWTR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)