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AT2G33540.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : C-terminal domain phosphatase-like 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
C-terminal domain phosphatase-like 3 (CPL3); FUNCTIONS IN: phosphoprotein phosphatase activity, CTD phosphatase activity; INVOLVED IN: response to salt stress; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: FCP1-like phosphatase, phosphatase domain (InterPro:IPR011947), NLI interacting factor (InterPro:IPR004274), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 4 (TAIR:AT5G58003.1); Has 1686 Blast hits to 1267 proteins in 263 species: Archae - 0; Bacteria - 131; Metazoa - 483; Fungi - 269; Plants - 334; Viruses - 2; Other Eukaryotes - 467 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G33540-MONOMERBioGrid:3266EC:3.1.3.16eggNOG:COG5190eggNOG:KOG0323EMBL:AC002332EMBL:AF486633
EMBL:CP002685EnsemblPlants:AT2G33540EnsemblPlants:AT2G33540.1entrez:817919Gene3D:3.40.50.1000Gene3D:3.40.50.10190GeneID:817919
Genevisible:Q8LL04GO:GO:0003723GO:GO:0005634GO:GO:0006351GO:GO:0008022GO:GO:0008420GO:GO:0009651
GO:GO:0009788GO:GO:0016591GO:GO:0046872GO:GO:0070940Gramene:AT2G33540.1hmmpanther:PTHR23081hmmpanther:PTHR23081:SF2
HOGENOM:HOG000085035InParanoid:Q8LL04InterPro:IPR001357InterPro:IPR004274InterPro:IPR011947InterPro:IPR023214iPTMnet:Q8LL04
KEGG:ath:AT2G33540KO:K18999ncoils:CoilOMA:VIRMKPRPaxDb:Q8LL04Pfam:PF03031Pfam:PF12738
Pfam:Q8LL04Pfscan:PS50172Pfscan:PS50969PhylomeDB:Q8LL04PIR:G84746PRIDE:Q8LL04PRO:PR:Q8LL04
PROSITE:PS50172PROSITE:PS50969ProteinModelPortal:Q8LL04Proteomes:UP000006548Reactome:R-ATH-112382Reactome:R-ATH-113418Reactome:R-ATH-674695
RefSeq:NP_180912.2SMART:SM00292SMART:SM00577STRING:3702.AT2G33540.1SUPFAM:SSF52113SUPFAM:SSF56784TAIR:AT2G33540
tair10-symbols:ATCPL3tair10-symbols:CPL3TIGRfam:TIGR02250TIGRFAMs:TIGR02250UniGene:At.43643UniProt:Q8LL04
Coordinates (TAIR10) chr2:-:14204081..14208797
Molecular Weight (calculated) 136487.00 Da
IEP (calculated) 5.62
GRAVY (calculated) -0.51
Length 1241 amino acids
Sequence (TAIR10)
(BLAST)
0001: MLVARSGCSR TLIRMGNDEN LMVMVDVEEG EIPDSVNTEI EVKHKSTTTT ADVGGDVDVG VVAGGRGGGG GGSNGNSRVW TMEELISQYP AYRPYANSGL
0101: SNLAWARAVQ NKPFNEGLVM DYEPRESDKI VIEDSDDEKE EGELEEGEID LVDNASDDNL VEKDTESVVL ISADKVEDDR ILKERDLEKK VKLIRGVLES
0201: TSLVEAQTGF EGVCSRILGA LESLRELVSD NDDFPKRDTL VQLSFASLQT INYVFCSMNN ISKERNKETM SRLLTLVNDH FSQFLSFNQK NEIETMNQDL
0301: SRSAIAVFAG TSSEENVNQM TQPSNGDSFL AKKLTSESTH RGAAYLRSRL PMLPLLDLHK DHDADSLPSP TRETTPSLPV NGRHTMVRPG FPVGRESQTT
0401: EGAKVYSYES DARKAVSTYQ QKFGLNSVFK TDDLPSPTPS GEPNDGNGDV GGEVSSSVVK SSNPGSHLIY GQDVPLPSNF NSRSMPVANS VSSTVPPHHL
0501: SIHAISAPTA SDQTVKPSAK SRDPRLRLAK PDAANVTIYS YSSGDARNLS KVELSADLVN PRKQKAADEF LIDGPAWKRQ KSDTDAPKAA GTGGWLEDTE
0601: SSGLLKLESK PRLIENGVTS MTSSVMPTSA VSVSQKVRTA STDTASLQSL LKDIAVNPTM LLNLLKMGER QKVPEKAIQK PMDPRRAAQL PGSSVQPGVS
0701: TPLSIPASNA LAANSLNSGV LQDSSQNAPA AESGSIRMKP RDPRRILHGS TLQRTDSSME KQTKVNDPST LGTLTMKGKA EDLETPPQLD PRQNISQNGT
0801: SKMKISGELL SGKTPDFSTQ FTKNLKSIAD MVVVSQQLGN PPASMHSVQL KTERDVKHNP SNPNAQDEDV SVSAASVTAA AGPTRSMNSW GDVEHLFEGY
0901: DDIQRVAIQR ERVRRLEEQN KMFASQKLSL VLDIDHTLLN SAKFNEVESR HEEILRKKEE QDREKPYRHL FRFLHMGMWT KLRPGIWNFL EKASKLYELH
1001: LYTMGNKLYA TEMAKLLDPK GVLFNGRVIS KGDDGDPLDG DERVPKSKDL EGVMGMESSV VIIDDSVRVW PQHKMNLIAV ERYLYFPCSR RQFGLLGPSL
1101: LELDRDEVPE EGTLASSLAV IEKIHQNFFS HTSLDEVDVR NILASEQRKI LAGCRIVFSR IIPVGEAKPH LHPLWQTAEQ FGAVCTTQVD EHVTHVVTNS
1201: LGTDKVNWAL TRGRFVVHPG WVEASAFLYQ RANENLYAIN P
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)