AT2G26390.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.519 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Serine protease inhibitor (SERPIN) family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, root, seed; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT2G25240.1); Has 6569 Blast hits to 6505 proteins in 479 species: Archae - 66; Bacteria - 381; Metazoa - 5076; Fungi - 12; Plants - 345; Viruses - 468; Other Eukaryotes - 221 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:11229087..11230491 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43223.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.60 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 389 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MELGKSIENQ NNVVARLAKK VIETDVANGS NVVFSPMSIN VLLSLIAAGS NPVTKEEILS FLMSPSTDHL NAVLAKIADG GTERSDLCLS TAHGVWIDKS 101: SYLKPSFKEL LENSYKASCS QVDFATKPVE VIDEVNIWAD VHTNGLIKQI LSRDCTDTIK EIRNSTLILA NAVYFKAAWS RKFDAKLTKD NDFHLLDGNT 201: VKVPFMMSYK DQYLRGYDGF QVLRLPYVED KRHFSMYIYL PNDKDGLAAL LEKISTEPGF LDSHIPLHRT PVDALRIPKL NFSFEFKASE VLKDMGLTSP 301: FTSKGNLTEM VDSPSNGDKL HVSSIIHKAC IEVDEEGTEA AAVSVAIMMP QCLMRNPDFV ADHPFLFTVR EDNSGVILFI GQVLDPSKH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)