suba logo
AT3G09940.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : monodehydroascorbate reductase
Curator
Summary (TAIR10)
Encodes a member of the monodehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.
Computational
Description (TAIR10)
monodehydroascorbate reductase (MDHAR); FUNCTIONS IN: monodehydroascorbate reductase (NADH) activity; INVOLVED IN: response to jasmonic acid stimulus, regulation of symbiosis, encompassing mutualism through parasitism, response to water deprivation, response to salt stress, response to symbiotic fungus; LOCATED IN: cytosol; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 31567 Blast hits to 31505 proteins in 3041 species: Archae - 687; Bacteria - 24961; Metazoa - 895; Fungi - 665; Plants - 718; Viruses - 0; Other Eukaryotes - 3641 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G09940-MONOMERBioCyc:ARA:GQT-682-MONOMERBRENDA:1.6.5.4EC:1.6.5.4
eggNOG:COG0446eggNOG:KOG1336EMBL:AC010927EMBL:AY084556
EMBL:AY093765EMBL:BT001054EMBL:CP002686EnsemblPlants:AT3G09940
EnsemblPlants:AT3G09940.1entrez:820155ExpressionAtlas:Q9SR59Gene3D:3.50.50.60
GeneID:820155Genevisible:Q9SR59GO:GO:0005829GO:GO:0009414
GO:GO:0009610GO:GO:0009651GO:GO:0009753GO:GO:0016656
GO:GO:0043903GO:GO:0050660gramene_pathway:1.6.5.4gramene_pathway:PWY-2261
hmmpanther:PTHR22912hmmpanther:PTHR22912:SF144HOGENOM:HOG000276711InParanoid:Q9SR59
InterPro:IPR016156InterPro:IPR023753OMA:RVEHWTGPaxDb:Q9SR59
Pfam:PF07992Pfam:Q9SR59PhylomeDB:Q9SR59PRIDE:Q9SR59
PRO:PR:Q9SR59ProteinModelPortal:Q9SR59Proteomes:UP000006548RefSeq:NP_566361.1
SMR:Q9SR59STRING:3702.AT3G09940.1SUPFAM:SSF51905SUPFAM:SSF55424
TAIR:AT3G09940tair10-symbols:ATMDAR3tair10-symbols:MDAR2tair10-symbols:MDAR3
tair10-symbols:MDHARUniGene:At.40014UniProt:Q9SR59
Coordinates (TAIR10) chr3:-:3056501..3059103
Molecular Weight (calculated) 48365.40 Da
IEP (calculated) 4.93
GRAVY (calculated) -0.21
Length 441 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEEKSYKYV IIGGGVAGGY AAREFSNQGL KPGELAIISK EPVPPFERPE LTKVYIDLEV NPTLANIYVC AGTGEAKQYP NWYKEKGIDL IVGTEIVKAD
101: LASKTLVSDD GKIYKYQTLL IATGSTNIRL SEIGVQEADV KNIFYLREIE DSDELALAME LYVQRGKAVI IGGGFLGLEI SSALRANNHE VTMVFPEPWL
201: VHRFFTAEIA SFYESYYANK GIKIIKGTVA TGFSTNSDGE VTEVKLEDGR TLEANIVVAG VGARPATSLF KGQLEEEKGG IKTDGFFKTS VPDVYALGDV
301: ATFPMKMYGG TRRVEHADNA RKSAAQAVKA IKAGEEGKTI PDYDYLPYFY SRFFKLSWEF YGENVGESVL FGDNDPKSPK PKFGTYWVKD GKVVGVFLEG
401: GTQEEHKAIA KVARAQPSVE SLDVLSEEGL SFATKFYSTS L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)