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AT4G21850.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.568
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : methionine sulfoxide reductase B9
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
methionine sulfoxide reductase B9 (MSRB9); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B7 (TAIR:AT4G21830.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G21850-MONOMERBioCyc:ARA:GQT-2649-MONOMEREC:1.8.4.12eggNOG:COG0229
eggNOG:KOG0856EMBL:AL021890EMBL:AL161556EMBL:AY086368
EMBL:BT004230EMBL:BT005691EMBL:CP002687EnsemblPlants:AT4G21850
EnsemblPlants:AT4G21850.1entrez:828273Gene3D:2.170.150.20GeneID:828273
Genevisible:Q84JT6GO:GO:0005829GO:GO:0006979GO:GO:0030091
GO:GO:0033743GO:GO:0046872hmmpanther:PTHR10173hmmpanther:PTHR10173:SF19
HOGENOM:HOG000243424InParanoid:Q84JT6InterPro:IPR002579InterPro:IPR011057
InterPro:IPR028427KEGG:ath:AT4G21850KO:K07305OMA:TEKETRY
PANTHER:PTHR10173PaxDb:Q84JT6Pfam:PF01641Pfam:Q84JT6
PhylomeDB:Q84JT6PIR:T05467PRIDE:Q84JT6PRO:PR:Q84JT6
PROSITE:PS51790ProteinModelPortal:Q84JT6Proteomes:UP000006548Reactome:R-ATH-5676934
RefSeq:NP_567638.1RefSeq:NP_849418.1SMR:Q84JT6STRING:3702.AT4G21850.1
SUPFAM:SSF51316TAIR:AT4G21850tair10-symbols:ATMSRB9tair10-symbols:MSRB9
TIGRfam:TIGR00357TIGRFAMs:TIGR00357UniGene:At.22710UniProt:Q84JT6
Coordinates (TAIR10) chr4:-:11591378..11592138
Molecular Weight (calculated) 15413.10 Da
IEP (calculated) 7.30
GRAVY (calculated) -0.48
Length 143 amino acids
Sequence (TAIR10)
(BLAST)
001: MPTSATAVAP STGSVQKKDQ DWRAILSPEQ FRVLREKGTE NRGKGEYTKL FDDGIYSCAG CATPLYKSTT KFDSGCGWPS FFDAIPGAIK QTPEAGGRRM
101: EITCAACDGH LGHVVKGEGF PTATDERHCV NSVSLKFSEI SSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)