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AT4G21840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.992
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : methionine sulfoxide reductase B8
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
methionine sulfoxide reductase B8 (MSRB8); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B7 (TAIR:AT4G21830.2); Has 8391 Blast hits to 8388 proteins in 2248 species: Archae - 76; Bacteria - 4942; Metazoa - 266; Fungi - 135; Plants - 208; Viruses - 1; Other Eukaryotes - 2763 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G21840-MONOMEREC:1.8.4.12eggNOG:COG0229eggNOG:KOG0856
EMBL:AL021890EMBL:AL161556EMBL:AY085310EMBL:CP002687
EnsemblPlants:AT4G21840EnsemblPlants:AT4G21840.1entrez:828272Gene3D:2.170.150.20
GeneID:828272Genevisible:O49707GO:GO:0005829GO:GO:0006979
GO:GO:0030091GO:GO:0033743GO:GO:0046872Gramene:AT4G21840.1
hmmpanther:PTHR10173hmmpanther:PTHR10173:SF19HOGENOM:HOG000243424InParanoid:O49707
InterPro:IPR002579InterPro:IPR011057InterPro:IPR028427KEGG:ath:AT4G21840
KO:K07305OMA:ISISCNGPANTHER:PTHR10173PaxDb:O49707
Pfam:O49707Pfam:PF01641PhylomeDB:O49707PIR:T05466
PRIDE:O49707PRO:PR:O49707PROSITE:PS51790ProteinModelPortal:O49707
Proteomes:UP000006548Reactome:R-ATH-5676934RefSeq:NP_193915.1SMR:O49707
STRING:3702.AT4G21840.1SUPFAM:SSF51316TAIR:AT4G21840tair10-symbols:ATMSRB8
tair10-symbols:MSRB8TIGRfam:TIGR00357TIGRFAMs:TIGR00357UniGene:At.25145
UniGene:At.32596UniProt:O49707
Coordinates (TAIR10) chr4:-:11587231..11588178
Molecular Weight (calculated) 15430.20 Da
IEP (calculated) 8.37
GRAVY (calculated) -0.47
Length 143 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMTAAAVPS SGSFQKQDEE WRAVLSPEQF RVLRLKGTDK RGKGEFTKKF EEGTYSCAGC GTALYKSTTK FDSGCGWPAF FDAIPGAIKQ TPEAGGRRME
101: ITCAVCDGHL GHVFKGEGYS TPTDQRHCVN SVSLKFASAD SSK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)