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AT2G39420.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
vacuole 0.892
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G39410.2); Has 4720 Blast hits to 4720 proteins in 1453 species: Archae - 32; Bacteria - 3497; Metazoa - 120; Fungi - 143; Plants - 476; Viruses - 35; Other Eukaryotes - 417 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1283-MONOMEReggNOG:COG2267eggNOG:KOG1455EMBL:AY080774
EMBL:AY122990EMBL:CP002685EnsemblPlants:AT2G39420EnsemblPlants:AT2G39420.1
entrez:818527ESTHER:arath-F12L6.8Gene3D:3.40.50.1820GeneID:818527
GO:GO:0016787Gramene:AT2G39420.1hmmpanther:PTHR11614hmmpanther:PTHR11614:SF92
InterPro:IPR000073InterPro:IPR022742InterPro:IPR029058KEGG:ath:AT2G39420
MEROPS:S33.A20OMA:TSICEKEPfam:PF12146PhylomeDB:Q8RXN7
PRINTS:PR00111Proteomes:UP000006548Reactome:R-ATH-1482883Reactome:R-ATH-426048
RefSeq:NP_181474.2SMR:Q8RXN7STRING:3702.AT2G39420.1SUPFAM:SSF53474
TAIR:AT2G39420UniGene:At.19572UniProt:Q8RXN7
Coordinates (TAIR10) chr2:+:16460442..16462872
Molecular Weight (calculated) 35706.20 Da
IEP (calculated) 7.84
GRAVY (calculated) -0.31
Length 317 amino acids
Sequence (TAIR10)
(BLAST)
001: MASETENIKY EESFIKNTRG MKLFTCKWVP AKQEPKALVF ICHGYAMECS ITMNSTARRL VKAGFAVYGI DYEGHGKSDG LSAYVPNFDH LVDDVSTHYT
101: SICEKEENKG KMRFLLGESM GGAVLLLLHR KKPQFWDGAV LVAPMCKIAE EMKPSPLVIS ILAKLSGVIP SWKIIPGQDI IETAFKQPEI RKQVRENPYC
201: YKGRPRLKTA YELLRVSTDL EKRLNEVSLP FIVLHGEDDK VTDKAVSRQL YEVASSSDKT FKLYPGMWHG LLYGETPENI ETVFADIIGW LDKKVADESG
301: GFESELKRKN DGIPLKG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)