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AT2G07360.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:20374526 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:18433157 (2008): nucleus
  • PMID:18433157 (2008): cytosol
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : SH3 domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SH3 domain-containing protein; FUNCTIONS IN: binding; LOCATED IN: cytosol, nucleus, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJTQeggNOG:ENOG410ZW1UEMBL:AK221245EMBL:BT006175EMBL:CP002685EnsemblPlants:AT2G07360EnsemblPlants:AT2G07360.1
entrez:815305Gene3D:1.25.10.10GeneID:815305Gramene:AT2G07360.1HOGENOM:HOG000083409InterPro:IPR001452InterPro:IPR011989
InterPro:IPR016024Pfscan:PS50002PROSITE:PS50002Proteomes:UP000006548RefSeq:NP_178746.2SMART:SM00326STRING:3702.AT2G07360.2
SUPFAM:SSF48371SUPFAM:SSF50044TAIR:AT2G07360UniGene:At.28072UniGene:At.75588UniProt:Q84R15
Coordinates (TAIR10) chr2:-:3047623..3057099
Molecular Weight (calculated) 130085.00 Da
IEP (calculated) 5.41
GRAVY (calculated) -0.28
Length 1196 amino acids
Sequence (TAIR10)
(BLAST)
0001: MAESSGTTLM DLISADPTPV PAQSTSSSAS STASQPTSAS ASSSSHLHHP MSTKTTLGEK KSKRATLMQI QNDTISVAKA ALNPVKANIM PQRQRQKKKP
0101: VSYSQLARSI HELAATLDQK SSQKQLVNHV FPKLAVYNSV DPSLAPSLLM LNQQCEDRNV LRYVYYYLAR ILSDTGMTPG GGIPTPNWDA LADIDAGGGV
0201: TRADVVPRIV NQLTNEATNS EFEFHARRLQ ALKALTYSPS GNSELLSKLY EIVFGILEKV GDVPHKRKKG VFGTKGGDKE SIMRSNLQYA AMSALRRLPL
0301: DPGNPLFLHR AAQGVFFADP VAVRHSLEIL SELATRDPYT VAMTLEKLAS PTGALQDILH MNDVLARVSL ARLCHSISRA RALDERPDIR SQFNSILYQL
0401: LLDPSERVCY EAILCILGKH DNTERMDERA AGWYRLTREI LKLPEAPSLS SKDKSNKTKR PQPLIKLVMR RLESSFRSFS RPVLHAAARV VQEMGKSRAA
0501: AFAMGLQDID ESVHVNAFSD ALDDAETNES SHPEGIRRTS SISAGPGRSD TIASLLAALM EVVRTTVACE CVYVRAMVIK ALIWMQSPDE SLDELKSIIA
0601: SELSDPGWPA ALVNDVLLTL HARFKATPDM AVILLEIARI FATKVPGKID ADVLQLLWKT CLVGAGPDGK HTALEAVTIV LDLPPPQPGS MAGLTSIDRV
0701: SASDPKSALA LQKLVQAAVW FLGENANYAA SEYAWESATP PGTALMMLDA DKMVAAASSR NPTLAGALTR LQRCAFSGSW EVRIVAIQAL TTIAIRSGEP
0801: FRLQIYEFLY TLAEGGVQSQ LSEMHLSNGE DQGASGTGLG VLITPMLKVL DEMYVGQDEL IKDIRHHDNA NKEWKDEELK KLYENHERLL DFVSMFCFIP
0901: RAKYLPLGPI SAKLIDTYRT KHNITASTGS TDPAVVATGI SDLIYESTQP APAASNSSGL DDDLVNAWAA NLGDDGLLGN NAPAMSRVNE FIAGVGTDAP
1001: DVEEENVFSR PSVGYDDMWA KTLLETSELE EEDARSGSSS PDSAGSVESS ISSHFGGMNY PSLFSSKPSS QATAKSGGSK YQSTYEGYGS PIREEPPPPY
1101: SYSEPQSRES FENPVAGSGS RSYESDDEEP RKSTGTRFGT ALYDFTAGGD DELNLTAEEE LEIEYEVDGW FYVKKKRPGR DGKMAGLVPV LYVNQS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)