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AT5G64910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23667806 (2013): plastid plastid thylakoid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
EMBL:AB019236EMBL:CP002688EnsemblPlants:AT5G64910EnsemblPlants:AT5G64910.1
entrez:836615ExpressionAtlas:Q9LV86GeneID:836615Gramene:AT5G64910.1
hmmpanther:PTHR33704hmmpanther:PTHR33704:SF1HOGENOM:HOG000236366ncoils:Coil
OMA:VECEYDWPhylomeDB:Q9LV86Proteomes:UP000006548RefSeq:NP_201296.1
TAIR:AT5G64910UniGene:At.75373UniGene:At.75593UniProt:Q9LV86
Coordinates (TAIR10) chr5:+:25940900..25944114
Molecular Weight (calculated) 54865.40 Da
IEP (calculated) 4.49
GRAVY (calculated) -1.03
Length 487 amino acids
Sequence (TAIR10)
(BLAST)
001: MRKGTKKRGG SRGGSRGGRK TGASSSASKN DDAVVEATTT QETQPTQETE ETEDKVESPA PEEEGKNEEE ANENQEEEAA KVESKAAEEG GNEEEAKEDK
101: EEEKEEAARE DKEEEEEAVK PDESASQKEE AKGASSSEPQ LRRGKRKRGT KTEAEKKVST PRAKKRAKTT KAQASEPEYF EEKRNLEDLW KATFSVGTEW
201: DQQDALNEFN WDFTNLEEAL EEGGELYGKQ VYVFGCTESH SVTYKDENKD VLVPVVVCID SPIPPSDEIG VASVQGEVGE IIAMKTMKMA WVPYIPLEQR
301: DRQVDNKNFP IFILGCTQRR SALKHLPDDR VKKFNYCLPY INNPYKVDDS EKSTVVKIMF PSEPPVECEY DWVKSVIEEF TDSLINEEVL LPEQKVAFEE
401: FVKEKSDKAM AAYDTAQEAL EKAKEGLSEE TKKAYQEMRL YKFYPLPSPD TPHTAGIEKV LREGSRSPVT VSPKPRNLFV SANFMNN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)