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AT1G13710.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 78, subfamily A, polypeptide 5
Curator
Summary (TAIR10)
Encodes the cytochrome P450 CYP78A5 monooxygenase. Contributes to the generation of a growth-stimulating signal distinct from the classical phytohormones that prevents proliferation arrest, promoting organ growth.
Computational
Description (TAIR10)
cytochrome P450, family 78, subfamily A, polypeptide 5 (CYP78A5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 10 (TAIR:AT1G74110.1); Has 31179 Blast hits to 31066 proteins in 1571 species: Archae - 49; Bacteria - 2905; Metazoa - 11364; Fungi - 6716; Plants - 9120; Viruses - 3; Other Eukaryotes - 1022 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G13710-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156
EMBL:AC027656EMBL:BT022025EMBL:BT029218EMBL:CP002684
EnsemblPlants:AT1G13710EnsemblPlants:AT1G13710.1entrez:837932Gene3D:1.10.630.10
GeneID:837932Genevisible:Q9LMX7GO:GO:0005506GO:GO:0005783
GO:GO:0008284GO:GO:0016020GO:GO:0016021GO:GO:0016709
GO:GO:0020037GO:GO:0035265GO:GO:0040009GO:GO:0044550
GO:GO:0046622GO:GO:0048437Gramene:AT1G13710.1hmmpanther:PTHR24298
hmmpanther:PTHR24298:SF112HOGENOM:HOG000218628InParanoid:Q9LMX7InterPro:IPR001128
InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT1G13710KO:K00517
OMA:MSPEAYVPaxDb:Q9LMX7Pfam:PF00067Pfam:Q9LMX7
PhylomeDB:Q9LMX7PIR:E86270PRIDE:Q9LMX7PRINTS:PR00385
PRINTS:PR00463PRO:PR:Q9LMX7PROSITE:PS00086ProteinModelPortal:Q9LMX7
Proteomes:UP000006548RefSeq:NP_172827.1scanprosite:PS00086SMR:Q9LMX7
STRING:3702.AT1G13710.1SUPFAM:SSF48264TAIR:AT1G13710tair10-symbols:CYP78A5
tair10-symbols:KLUTMHMM:TMhelixUniGene:At.42013UniProt:Q9LMX7
Coordinates (TAIR10) chr1:-:4702932..4704592
Molecular Weight (calculated) 57647.00 Da
IEP (calculated) 8.57
GRAVY (calculated) 0.07
Length 517 amino acids
Sequence (TAIR10)
(BLAST)
001: MSPEAYVLFF NSFNLVTFEA FASVSLIIAT VAFLLSPGGL AWAWTGSSKS RVSIPGPSGS LSVFSGSNPH RVLAALAKRF KASPLMAFSV GFSRFVISSE
101: PETAKEILSS SAFADRPVKE SAYELLFHRA MGFAPYGEYW RNLRRISSTH LFSPRRIASF EGVRVGIGMK MVKKIKSLVT SDACGEVEVK KIVHFGSLNN
201: VMTTVFGESY DFDEVNGKGC FLERLVSEGY ELLGIFNWSD HFWFLRWFDF QGVRKRCRAL VSEVNTFVGG IIEKHKMKKG NNLNGEENDF VDVLLGLQKD
301: EKLSDSDMIA VLWEMIFRGT DTVAILVEWV LARMVLHQDI QDKLYREIAS ATSNNIRSLS DSDIPKLPYL QAIVKETLRL HPPGPLLSWA RLAIHDVHVG
401: PNLVPAGTIA MVNMWSITHN AKIWTDPEAF MPERFISEDV SIMGSDLRLA PFGSGRRVCP GKAMGLATVH LWIGQLIQNF EWVKGSCDVE LAEVLKLSME
501: MKNPLKCKAV PRNVGFA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)