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AT4G37750.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Integrase-type DNA-binding superfamily protein
Curator
Summary (TAIR10)
ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.
Computational
Description (TAIR10)
AINTEGUMENTA (ANT); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G72570.1); Has 7251 Blast hits to 5191 proteins in 264 species: Archae - 0; Bacteria - 9; Metazoa - 18; Fungi - 8; Plants - 7086; Viruses - 4; Other Eukaryotes - 126 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IEVJeggNOG:ENOG410Y9X6EMBL:AL035709EMBL:AL161592
EMBL:AR316367EMBL:AY080706EMBL:AY117207EMBL:CP002687
EMBL:U40256EMBL:U41339EMBL:U44028EnsemblPlants:AT4G37750
EnsemblPlants:AT4G37750.1entrez:829931Gene3D:3.30.730.10GeneID:829931
Genevisible:Q38914GO:GO:0003677GO:GO:0003700GO:GO:0005634
GO:GO:0006351GO:GO:0009908GO:GO:0010492GO:GO:0030154
GO:GO:0042127Gramene:AT4G37750.1hmmpanther:PTHR32467hmmpanther:PTHR32467:SF11
HOGENOM:HOG000239258InParanoid:Q38914InterPro:IPR001471InterPro:IPR016177
InterPro:IPR031112KEGG:ath:AT4G37750KO:K09285OMA:TSHKEAM
PANTHER:PTHR32467PaxDb:Q38914Pfam:PF00847Pfam:Q38914
Pfscan:PS51032PhylomeDB:Q38914PIR:S71365PRIDE:Q38914
PRINTS:PR00367PRO:PR:Q38914PROSITE:PS51032ProteinModelPortal:Q38914
Proteomes:UP000006548RefSeq:NP_195489.1SMART:SM00380SMR:Q38914
STRING:3702.AT4G37750.1SUPFAM:SSF54171TAIR:AT4G37750tair10-symbols:ANT
tair10-symbols:CKCtair10-symbols:CKC1tair10-symbols:DRGUniGene:At.1556
UniProt:Q38914
Coordinates (TAIR10) chr4:+:17739782..17742189
Molecular Weight (calculated) 61728.30 Da
IEP (calculated) 7.87
GRAVY (calculated) -0.76
Length 555 amino acids
Sequence (TAIR10)
(BLAST)
001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)