AT5G62240.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cell cycle regulated microtubule associated protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Cell cycle regulated microtubule associated protein; CONTAINS InterPro DOMAIN/s: Cell cycle regulated microtubule associated protein (InterPro:IPR022021); BEST Arabidopsis thaliana protein match is: Cell cycle regulated microtubule associated protein (TAIR:AT5G07170.1); Has 217 Blast hits to 213 proteins in 53 species: Archae - 0; Bacteria - 19; Metazoa - 89; Fungi - 1; Plants - 77; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:25002541..25004569 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43251.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.22 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.89 | ||||||||||||||||||||||||||||||||
| Length | 377 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVPESSSRIM SFSGDDFEFD IDFEFDAPRF YDFSRPELYS ETEEIEIWFQ SSGNYPPSPF SPKFNWKFEP FKQITNTISE SKPVEIIESS EAETGLNCKD 101: KFNGFIYYNQ TVKDVSKKKS KSKTKTSNST LTRPTASLLA RQNKPLDIYS VQLLTRCQRS LAKFGENVAP VLVSKLQNQD TNRQKQEAKV AHVSSRAKLT 201: VPKEPNLRTA ERSERHRSKV NTQREQIATS NSKRHIRNKN INLEPVSTSL AKTNTPRSQH FQAFRLRTSL RAKERSSNAK TDVVQENDAT KSRTLKKPID 301: SLKTRIVKEN HSRKINCQVY ESKSSPLDPK ISSKEDLVEA IRIEYGNQSS CRTDINRSLD LCRKFDSQEV ARNLITA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)