AT3G36659.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.766 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Plant invertase/pectin methylesterase inhibitor superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G23350.1); Has 6041 Blast hits to 2669 proteins in 441 species: Archae - 12; Bacteria - 608; Metazoa - 559; Fungi - 455; Plants - 1091; Viruses - 141; Other Eukaryotes - 3175 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:+:2100189..2100983 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 27538.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.11 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.00 | ||||||||||||||||||||||||||||||||||||
| Length | 264 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEFNKTYRII VIFTVSILVT ISTHVESRSD SPFSTPAPAP EVMKPIASPA NSPAEIYTDS PVASPEAPAD SFSPKNPPVE IDIYSPAASP EAPVASPEAP 101: AESSSAAPSG IKVSSSPKSL LNPPLLSPEI KTICGKTDNP PLCESSVSPL LTPQLKPNTS SVLILAIQAS ITATKAAMAI VEKVDASDCQ ELYDDAVVNL 201: EDAVNAVKSS DIATVNTNLS AAMTDYSTCN DGFEESGEPN PLAYVADKLT KMVSNCLAIS TLIK |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)