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AT2G44560.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycosyl hydrolase 9B11
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glycosyl hydrolase 9B11 (GH9B11); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B9 (TAIR:AT2G44540.1); Has 1847 Blast hits to 1833 proteins in 271 species: Archae - 2; Bacteria - 688; Metazoa - 179; Fungi - 19; Plants - 915; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G44560-MONOMERCAZy:GH9EC:3.2.1.4eggNOG:ENOG410IKVV
eggNOG:ENOG410XPC9EMBL:AC003672EMBL:AC004521EMBL:AK175889
EMBL:CP002685EnsemblPlants:AT2G44560EnsemblPlants:AT2G44560.1entrez:819064
Gene3D:1.50.10.10GeneID:819064Genevisible:Q8S8Q4GO:GO:0005576
GO:GO:0008810GO:GO:0030245GO:GO:0071555Gramene:AT2G44560.1
gramene_pathway:3.2.1.4gramene_pathway:PWY-1001hmmpanther:PTHR22298hmmpanther:PTHR22298:SF12
HOGENOM:HOG000021033InParanoid:Q8S8Q4InterPro:IPR001701InterPro:IPR008928
InterPro:IPR012341InterPro:IPR018221KEGG:00500+3.2.1.4KEGG:ath:AT2G44560
OMA:GKVESNGPaxDb:Q8S8Q4Pfam:PF00759Pfam:Q8S8Q4
PhylomeDB:Q8S8Q4PIR:T01583PRIDE:Q8S8Q4PRO:PR:Q8S8Q4
PROSITE:PS00592ProteinModelPortal:Q8S8Q4Proteomes:UP000006548RefSeq:NP_181984.1
scanprosite:PS00592SMR:Q8S8Q4STRING:3702.AT2G44560.1SUPFAM:SSF48208
TAIR:AT2G44560tair10-symbols:AtGH9B11tair10-symbols:GH9B11UniGene:At.36743
UniProt:Q8S8Q4
Coordinates (TAIR10) chr2:-:18391914..18393654
Molecular Weight (calculated) 53200.50 Da
IEP (calculated) 5.26
GRAVY (calculated) -0.22
Length 491 amino acids
Sequence (TAIR10)
(BLAST)
001: MSQLKIGSSQ CLWTSICIVL FVLSMARGAV SRNYGDALTK SLLYFEAQRS GKLPSNQRVT WRGDSALRDG SDAHVDLTGG YYDAGDNMKF GFPLAFFTTM
101: LAWSNIEMAT QLKAHQEQEN ALAALKWATD FLIKAHPEPN VLYGQVGDGN SDHECWMRPE DMTTPRPSFR IDAQHPGSDL AGETAAAMAA ASIAFAPSDE
201: AYAQILIGHA KELFEFAKAY PGIYQNSITN AGGFYASSGY EDELLWAAAW LHRATNDQIY LDYLTQASGT GGPRTAFSWD DKFVGAQVLV AKLALEGKVE
301: SNGKIAEYKS MAEQFICNCA QKGSNNVKKT PGGLLYFLPW NNLQYTTAAT FVLSAYSKYL TDAKASIQCP NGALQASDLL DLARSQVDYI LGSNPQNMSY
401: MVGVGTNYPK KPHHRAASIV SITKDKTPVT CSEGFDAWFN NPAPNPNVLM GAVVGGPNDN DVYGDERTDY QHAEPAPATA APFVGVLAAV A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)