AT5G60880.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : breaking of asymmetry in the stomatal lineage | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes BASL (BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE), a regulator of asymmetric divisions. In asymmetrically dividing stomatal-lineage cells, BASL accumulates in a polarized crescent at the cell periphery before division, and then localizes differentially to the nucleus and a peripheral crescent in self-renewing cells and their sisters after division. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE (BASL); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:24488553..24489703 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 29124.70 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.38 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.05 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 262 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASQWTIPKL VTWRVRDWAS CFLACKIPLD GDEDGANNNG NTTNNNNLTF KRIKRKIKST KKKRSERKLS LSPPGTRHHH LHLRSSSVSP TTSGSQHRRL 101: SWPQPPVSEE SGFIVFCFDR EDGGFDVVKE GKQEKKETES SSEKSPRTVN RKLIYGDQGV GGTEKNNSPE TKGTEQDQND NTSCQGTKDV SSDVTERTKE 201: EEDIDASDKS SGSSHSDEGR GSFAFPILGV EWMGSPAKMP ESDDLSPKKQ KPVALGFQCC RF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)