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AT5G58120.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (TIR-NBS-LRR class) family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G63750.3); Has 15550 Blast hits to 12870 proteins in 462 species: Archae - 6; Bacteria - 602; Metazoa - 848; Fungi - 29; Plants - 13811; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:ENOG410IGA8EMBL:AB024029EMBL:CP002688
EnsemblPlants:AT5G58120EnsemblPlants:AT5G58120.1entrez:835924Gene3D:3.40.50.10140
Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:835924GO:GO:0005524
GO:GO:0007165GO:GO:0043531Gramene:AT5G58120.1hmmpanther:PTHR11017
hmmpanther:PTHR11017:SF20HOGENOM:HOG000064702InterPro:IPR000157InterPro:IPR002182
InterPro:IPR003593InterPro:IPR011713InterPro:IPR027417InterPro:IPR032675
KEGG:ath:AT5G58120OMA:ISTHINYPfam:PF00931Pfam:PF01582
Pfam:PF07725Pfscan:PS50104PhylomeDB:Q9FGT2PROSITE:PS50104
Proteomes:UP000006548RefSeq:NP_200620.1SMART:SM00255SMART:SM00382
SMR:Q9FGT2STRING:3702.AT5G58120.1SUPFAM:SSF52058SUPFAM:SSF52200
SUPFAM:SSF52540TAIR:AT5G58120UniGene:At.49184UniGene:At.63913
UniProt:Q9FGT2
Coordinates (TAIR10) chr5:+:23517492..23520927
Molecular Weight (calculated) 119942.00 Da
IEP (calculated) 7.02
GRAVY (calculated) -0.30
Length 1046 amino acids
Sequence (TAIR10)
(BLAST)
0001: MASSSSSSRS RTWRYRVFTN FHGPDVRKTF LSHLRKQFSY NGISMFNDQS IERSQTIVPA LTGAIKESRI SIVVLSKNYA SSRWCLDELL EILKCREDIG
0101: QIVMTVFYGV DPSDVRKQTG EFGIAFNKTC EGKTNEETQK WSKALNDVGN IAGEHFFNWD NEAKMIEKIA RDVSNKLNAT ISWDFEDMVG IEAHLQKMQS
0201: LLHLDYEDGA MIVGIYGPAG IGKTTIARAL HSRLSSSFQL TCFMENIRGS YNSGLDEYGL KLRLQEQLLS KVLNHDGIRI NHLGAIPERL CDQKVLIILD
0301: DVDDLQQLEA LANETNWFGP GSRIIVTTED QELLEQHDVN KKYHVDFPTR EEACKIFCTY AFRRSFAPYG FEKLAERVTW LCSNLPLGLR VMGSTLRGKK
0401: EDDWEGILRR LENSLDRKID GVLRVGYDHL CEDDQFLYLL IAFFFNYVDD DHVKAMLVED NLDVKLGLKT LAYKSLIQIS AEGNIVMHKL LQRVGREAIQ
0501: RQEPTKRRIL IDAREICDVL RYGKGTSNVS GISFDTSDMS EVTISDDAFK RLHDLRFLKV TKSRYDGKYR MHIPAGIEFP CLLRLLHWEA YPSKCLPPTF
0601: NPEFLVELNM QGSQLEHLWS GTQSLRNLKN MDLGWSPNLK ELPDLTNATN LEDLNLNSCE SLVEIPSSFS HLHKLKNLWM SYCINLQVIP AHMNLVSLER
0701: VTMTGCSRFR KIPVISTHIN YLDIAHNTEF EVVHASIALW CRLHYLNMSY NENFMGLTHL PMSLTQLILR YSDIERIPDC IKALHQLFSL DLTGCRRLAS
0801: LPELPGSLLD LEAEDCESLE TVFSPLHTPR ALLNFTNCFK LGGQARRAII RRRSEIIGKA LLPGREVPAE FDHRAKGNSL TIILNGYRPS YDFIQYLVCV
0901: VISPNQEITK ISDSSTLLCH TNGYIFPSYE EVYIGAVSKC RKEHLFIFRS GYYLNVDPSG ASREIVFEFS SKSQDFDIIE CGVKIWTAQS IERGYLVFED
1001: DNEIKHDDHT NRVRGHYKAS NVDYKSVSRK RPRKTDLKLE IPRRRF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)