AT1G67470.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.958 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G65250.1); Has 33748 Blast hits to 33462 proteins in 1596 species: Archae - 6; Bacteria - 3452; Metazoa - 6540; Fungi - 924; Plants - 20581; Viruses - 40; Other Eukaryotes - 2205 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:25272247..25273416 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45197.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.97 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 389 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGWWRKKKKP KSEIASERGA KLLKDLIECC DGKSNPIKFF SADEIRKATN NFGVSNLVSE LSHDFDYKWY SGKNENHDMI LVRKAFSQSV YYKDTFFRDI 101: AVSSMVSGHK NFLKLIGYCL EFEEPVMVYH GVKKHYHLES SEQPWKRRMK IAEDIATALA YLHTAFPRPF VYRCLSLTNI LLDEDGVAKL MDFSFCVSIP 201: EGETFVQVDY IAGTVDYLKP NYLKHGVVSE ETDVFAVGHS MQMLLMGEKI FDRIMRRPFP TSKFMEEPKM DEIADPEMGE ISEEELCQMK AFLLLSLRCT 301: GHVGEVPTMV EVAKELKSIQ RCLHNDTFSP SVETQFDSHQ DISSSVILSN QTKDTRALLR CIACHVFDEM FQWVMMNWFR FFRRNRRIC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)