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AT3G44630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.564
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (TIR-NBS-LRR class) family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G44480.1); Has 41227 Blast hits to 23573 proteins in 843 species: Archae - 26; Bacteria - 2454; Metazoa - 3797; Fungi - 287; Plants - 32967; Viruses - 4; Other Eukaryotes - 1692 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:ENOG410IGA8EMBL:AL138652EMBL:BT005790
EMBL:CP002686EnsemblPlants:AT3G44630EnsemblPlants:AT3G44630.1EnsemblPlants:AT3G44630.2
entrez:823589ExpressionAtlas:Q9M1P1Gene3D:3.40.50.10140Gene3D:3.40.50.300
Gene3D:3.80.10.10GeneID:823589GO:GO:0005524GO:GO:0007165
GO:GO:0043531Gramene:AT3G44630.1Gramene:AT3G44630.2hmmpanther:PTHR11017
hmmpanther:PTHR11017:SF20HOGENOM:HOG000064702InterPro:IPR000157InterPro:IPR002182
InterPro:IPR003593InterPro:IPR011713InterPro:IPR027417InterPro:IPR032675
KEGG:ath:AT3G44630Pfam:PF00931Pfam:PF01582Pfam:PF07725
Pfscan:PS50104PhylomeDB:Q9M1P1PIR:T47438PROSITE:PS50104
Proteomes:UP000006548RefSeq:NP_190049.1RefSeq:NP_850654.1SMART:SM00255
SMART:SM00382SMR:Q9M1P1STRING:3702.AT3G44630.3SUPFAM:SSF52058
SUPFAM:SSF52200SUPFAM:SSF52540TAIR:AT3G44630UniGene:At.23854
UniProt:Q9M1P1
Coordinates (TAIR10) chr3:+:16196292..16200423
Molecular Weight (calculated) 138985.00 Da
IEP (calculated) 7.97
GRAVY (calculated) -0.26
Length 1214 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGSAMSLSCS KRKATSQDVD SESCKRRKTC STNDAENCIF IPDESSWSLC ANRVITVAAV ALTNFRFQQD NQESNSSSLS LPSLATSVSR NWKHDVFPSF
0101: HGADVRRTFL SHIMESFRRK GIDTFIDNNI ERSKSIGPEL KEAIKGSKIA IVLLSRKYAS SSWCLDELAE IMKCRQMVGQ IVMTIFYEVE PTDIKKQTGE
0201: FGKAFTKTCR GKPKEQVERW RKALEDVATI AGYHSHSWRN EADMIEKIAT DVSNMLNSFT PSRDFDGLVG MRAHMDMLEQ LLRLDLDEVR IIGIWGPPGI
0301: GKTTIARFLL NQVSDRFQLS AIMVNIKGCY PRPCFDEYSA QLQLQNQMLS QMINHKDIMI SHLGVAQERL RDKKVFLVLD EVDQLGQLDA LAKETRWFGP
0401: GSRIIITTED LGVLKAHGIN HVYKVEYPSN DEAFQIFCMN AFGQKQPHEG FDEIAWEVKA LAGKLPLGLK VLGSALRGKS KPEWERTLPR LRTSLDGKIG
0501: GIIQFSYDAL CDEDKYLFLY IACLFNGEST TKVKELLGKF LDVRQGLHVL AQKSLISFDE EISWKQIVQV LLLNKFSHVR HTKRNKSQII RMHTLLEQFG
0601: RETSRKQFVH HRYTKHQLLV GERDICEVLD DDTTDNRRFI GINLDLYKNE EELNISEKAL ERIHDFQFVK INYVFTHQPE RVQLALEDLI YHSPRIRSLK
0701: WFPYQNICLP STFNPEFLVE LDMRCSKLRK LWEGTKQLRN LKWMDLSDSR DLKELPSSIE KLTSLQILDL RDCSSLVKLP PSINANNLQG LSLTNCSRVV
0801: KLPAIENVTN LHQLKLQNCS SLIELPLSIG TANNLWKLDI RGCSSLVKLP SSIGDMTNLK EFDLSNCSNL VELPSSIGNL QKLFMLRMRG CSKLETLPTN
0901: INLISLRILD LTDCSQLKSF PEISTHISEL RLKGTAIKEV PLSITSWSRL AVYEMSYFES LKEFPHALDI ITDLLLVSED IQEVPPWVKR MSRLRALRLN
1001: NCNSLVSLPQ LPDSLDYIYA DNCKSLERLD CCFNNPEIRL YFPKCFKLNQ EARDLIMHTS TRKYAMLPSI QVPACFNHRA TSGDYLKIKL KESSLPTTLR
1101: FKACIMLVKV NEEMRDDEMW PSVLIAIRVK QNDLKVLCTA SIYPVLTEHI YTFELEVEEV TSTELVFEFT PFHKSNWKIG ECGILQRETR SFCRSSSPDL
1201: PPESSRVFLA RTTV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)