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AT4G19510.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.716
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (TIR-NBS-LRR class)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT4G12010.1); Has 24495 Blast hits to 16844 proteins in 780 species: Archae - 22; Bacteria - 1657; Metazoa - 3405; Fungi - 143; Plants - 18330; Viruses - 4; Other Eukaryotes - 934 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J8UWeggNOG:ENOG4112BMQEMBL:CP002687EnsemblPlants:AT4G19510
EnsemblPlants:AT4G19510.1entrez:827692ExpressionAtlas:F4JT80Gene3D:3.40.50.10140
Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:827692GO:GO:0007165
GO:GO:0043531Gramene:AT4G19510.1hmmpanther:PTHR11017hmmpanther:PTHR11017:SF162
InParanoid:F4JT80InterPro:IPR000157InterPro:IPR001611InterPro:IPR002182
InterPro:IPR011713InterPro:IPR027417InterPro:IPR032675iPTMnet:F4JT80
KEGG:ath:AT4G19510OMA:LLMFDNDPaxDb:F4JT80Pfam:PF00931
Pfam:PF01582Pfam:PF07725Pfam:PF13855Pfscan:PS50104
Pfscan:PS51450PRIDE:F4JT80PROSITE:PS50104PROSITE:PS51450
ProteinModelPortal:F4JT80Proteomes:UP000006548RefSeq:NP_193686.5SMART:SM00255
SMR:F4JT80STRING:3702.AT4G19510.1SUPFAM:SSF52058SUPFAM:SSF52200
SUPFAM:SSF52540TAIR:AT4G19510UniGene:At.43454UniProt:F4JT80
Coordinates (TAIR10) chr4:+:10633685..10637841
Molecular Weight (calculated) 138743.00 Da
IEP (calculated) 6.98
GRAVY (calculated) -0.32
Length 1210 amino acids
Sequence (TAIR10)
(BLAST)
0001: MKKTRGSFLE CSAPQSFLSI QYTCRRDFPQ VDLCNHRPPL MAFASSSSSI VLSKCEFDVF VSFRGADTRH DFTSHLVKYL RGKGIDVFSD AKLRGGEYIS
0101: LLFDRIEQSK MSIVVFSEDY ANSWWCLEEV GKIMQRRKEF NHGVLPIFYK VSKSDVSNQT GSFEAVFQSP TKIFNGDEQK IEELKVALKT ASNIRGFVYP
0201: ENSSEPDFLD EIVKNTFRML NELSPCVIPD DLPGIESRSK ELEKLLMFDN DECVRVVGVL GMTGIGKTTV ADIVYKQNFQ RFDGYEFLED IEDNSKRYGL
0301: PYLYQKLLHK LLDGENVDVR AQGRPENFLR NKKLFIVLDN VTEEKQIEYL IGKKNVYRQG SRIVIITRDK KLLQKNADAT YVVPRLNDRE AMELFCLQVF
0401: GNHYPTEEFV DLSNDFVCYA KGLPLALKLL GKGLLTHDIN YWKKKLEFLQ VNPDKELQKE LKSSYKALDD DQKSVFLDIA CFFRIEMHDL LHAMGKEIGK
0501: EKSIRKAGER RRLWNHKDIR DILEHNTGTE CVRGIFLNMS EVRRIKLFPA AFTMLSKLKF LKFHSSHCSQ WCDNDHIFQC SKVPDHFPDE LVYLHWQGYP
0601: YDCLPSDFDP KELVDLSLRY SHIKQLWEDE KNTESLRWVD LGQSKDLLNL SGLSRAKNLE RLDLEGCTSL DLLGSVKQMN ELIYLNLRDC TSLESLPKGF
0701: KIKSLKTLIL SGCLKLKDFH IISESIESLH LEGTAIERVV EHIESLHSLI LLNLKNCEKL KYLPNDLYKL KSLQELVLSG CSALESLPPI KEKMECLEIL
0801: LMDGTSIKQT PEMSCLSNLK ICSFCRPVID DSTGLVVLPF SGNSFLSDLY LTNCNIDKLP DKFSSLRSLR CLCLSRNNIE TLPESIEKLY SLLLLDLKHC
0901: CRLKSLPLLP SNLQYLDAHG CGSLENVSKP LTIPLVTERM HTTFIFTDCF KLNQAEKEDI VAQAQLKSQL LARTSRHHNH KGLLLDPLVA VCFPGHDIPS
1001: WFSHQKMGSL IETDLLPHWC NSKFIGASLC VVVTFKDHEG HHANRLSVRC KSKFKSQNGQ FISFSFCLGG WNESCGSSCH EPRKLGSDHV FISYNNCNVP
1101: VFKWSEETNE GNRCHPTSAS FEFYLTDETE RKLECCEILR CGMNFLYARD ENDRKFQGIR VTDTVERTSS EALVTIRGQS HSRIEERRYG RIRDEIMDMT
1201: GSSMIGGPES
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)