AT5G57880.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.998 What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : multipolar spindle 1 | ||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes MULTIPOLAR SPINDLE 1 (MPS1), involved in meiotic spindle organization. | ||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
MULTIPOLAR SPINDLE 1 (MPS1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr5:+:23443977..23446439 | ||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 44462.20 Da | ||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.98 | ||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||||||
Length | 385 amino acids | ||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSSSVAEANH TEKEESLRLA IAVSLLRSKF QNHQSSSSTS RCYVSSESDA LRWKQKAKER KKEIIRLQED LKDAESSFHR DLFPANASCK CYFFDNLGVF 101: SGRRIGEASE SRFNDVLRRR FLRLACVVIL SLARRRSRRK LTRSSQRLQP SEPDYEEEAE HLRISIDFLL ELSEADSNDS NFSNWSHQAV DFIFASLKKL 201: ISMGRNLESV EESISFMITQ LITRMCTPVK GNEVKQLETS VGFYVQHLIR KLGSEPFIGQ RAIFAISQRI SILAENLLFM DPFDESFPEM DECMFILIQL 301: IEFLICDYLL PWANEAFDNV MFEEWIASVV HARKAVKALE ERNGLYLLYM DRVTGELAKR VGQITSFREV EPAILDKILA YQEIE |
||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)