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AT5G57590.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : adenosylmethionine-8-amino-7-oxononanoate transaminases
Curator
Summary (TAIR10)
Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase.
Computational
Description (TAIR10)
biotin auxotroph 1 (BIO1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:MONOMER-8566BRENDA:2.6.1.62BRENDA:6.3.3.3EC:2.6.1.62
EC:6.3.3.3eggNOG:COG0161eggNOG:ENOG410IPFWEMBL:AB011482
EMBL:AK175602EMBL:BT010433EMBL:CP002688EMBL:EF081156
EMBL:EU089963EMBL:EU090805EMBL:HQ857557EMBL:HQ857558
EnsemblPlants:AT5G57590EnsemblPlants:AT5G57590.1entrez:835863Gene3D:3.40.50.300
Gene3D:3.40.640.10Gene3D:3.90.1150.10GeneID:835863Genevisible:B0F481
GO:GO:0000287GO:GO:0004015GO:GO:0004141GO:GO:0005524
GO:GO:0005739GO:GO:0009102GO:GO:0030170GO:GO:0042802
gramene_pathway:2.6.1.62gramene_pathway:PWY-3701gramene_plant_reactome:1119610gramene_plant_reactome:6873929
HAMAP:MF_00336hmmpanther:PTHR11986hmmpanther:PTHR11986:SF8HOGENOM:HOG000201750
InParanoid:B0F481InterPro:IPR004472InterPro:IPR005814InterPro:IPR015421
InterPro:IPR015422InterPro:IPR015424InterPro:IPR027417KEGG:00780+6.3.3.3
KEGG:ath:AT5G57590KO:K19562OMA:KVEWYRGPANTHER:PTHR11986
PaxDb:B0F481PDB:4A0FPDB:4A0GPDB:4A0H
PDB:4A0RPDBsum:4A0FPDBsum:4A0GPDBsum:4A0H
PDBsum:4A0RPfam:B0F481Pfam:PF00202Pfam:PF13500
PhylomeDB:B0F481PRIDE:B0F481PRO:PR:B0F481PROSITE:PS00600
ProteinModelPortal:B0F481Proteomes:UP000006548RefSeq:NP_200567.2scanprosite:PS00600
SMR:B0F481STRING:3702.AT5G57590.1SUPFAM:SSF52540SUPFAM:SSF53383
TAIR:AT5G57590tair10-symbols:BIO1UniGene:At.29327UniPathway:UPA00078
UniProt:B0F481
Coordinates (TAIR10) chr5:-:23318593..23322687
Molecular Weight (calculated) 91940.50 Da
IEP (calculated) 6.71
GRAVY (calculated) -0.04
Length 833 amino acids
Sequence (TAIR10)
(BLAST)
001: MIPVTATLIR HRLRHLRHRI RFKSTSVSPF HLPLNHPTYL IWSANTSLGK TLVSTGIAAS FLLQQPSSSA TKLLYLKPIQ TGFPSDSDSR FVFSKLDSLS
101: LRRQIPISIS NSVLHSSLPA AKSLGLNVEV SESGMCSLNF RDEKTVTGAP ELLCKTLYAW EAAISPHLAA ERENATVEDS VVLQMIEKCL KEEMECGVKS
201: EKSDLLCLVE TAGGVASPGP SGTLQCDLYR PFRLPGILVG DGRLGGISGT IAAYESLKLR GYDIAAVVFE DHGLVNEVPL TSYLRNKVPV LVLPPVPKDP
301: SDDLIEWFVE SDGVFKALKE TMVLANLERL ERLNGMAKLA GEVFWWPFTQ HKLVHQETVT VIDSRCGENF SIYKASDNSS LSQQFDACAS WWTQGPDPTF
401: QAELAREMGY TAARFGHVMF PENVYEPALK CAELLLDGVG KGWASRVYFS DNGSTAIEIA LKMAFRKFCV DHNFCEATEE EKHIVVKVIA LRGSYHGDTL
501: GAMEAQAPSP YTGFLQQPWY TGRGLFLDPP TVFLSNGSWN ISLPESFSEI APEYGTFTSR DEIFDKSRDA STLARIYSAY LSKHLQEHSG VRQSAHVGAL
601: IIEPVIHGAG GMHMVDPLFQ RVLVNECRNR KIPVIFDEVF TGFWRLGVET TTELLGCKPD IACFAKLLTG GMVPLAVTLA TDAVFDSFSG DSKLKALLHG
701: HSYSAHAMGC ATAAKAIQWF KDPETNHNIT SQGKTLRELW DEELVQQISS HSAVQRVVVI GTLFALELKA DASNSGYASL YAKSLLIMLR EDGIFTRPLG
801: NVIYLMCGPC TSPEICRRLL TKLYKRLGEF NRT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)