AT2G22650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.929 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : FAD-dependent oxidoreductase family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:9624703..9626931 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45682.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.85 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||
| Length | 420 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MITAVLHPCS SASLSLPNRP PLRYAILGAG FAGISVAWHL LKESPKELRL SVDVYDEVGI GGGASGVSGG LLHPYSPKGK LLWHGAECWR ECLELLNVAE 101: TAASSSYQST ENRDFSESFG NFMVRRRGIL RPATNAKTLD LMSDNARNCL ASCVVETIDK DGAQNLVPNL YLPLNCAFYF PGAMNVNPHR YLQALFLACQ 201: SSAKTSLGRK NITLVNKSIT DVLELEGGYD AVVICLGSKV DFLPGLTGKL PLRTCRGVIT HMQLHESARG SYPDDGPSIL SDAWLAVQGP RNLHMGSTWE 301: WQSRNYSSDV PAEEASRALN ELLPKASAVY PDIEKWEFAG ARAGLRAMPP VTSHGSLPLL GCVNQLIGAG QFCNFWVFSG LGSRGLLYHA WLGKLMSKAV 401: LSCNEELLPS ELTSWKKNRQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)