suba logo
AT2G31190.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function, DUF647
Curator
Summary (TAIR10)
Encodes RUS2 (root UVB sensitive2), a DUF647-containing protein that is homologous to the RUS1 protein. RUS2 works with RUS1 in a root UV-B sensing pathway that plays a vital role in Arabidopsis early seedling morphogenesis and development. Required for auxin polar transport.
Computational
Description (TAIR10)
ROOT UV-B SENSITIVE 2 (RUS2); INVOLVED IN: response to UV-B, auxin polar transport; LOCATED IN: mitochondrion, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT5G49820.1); Has 444 Blast hits to 440 proteins in 132 species: Archae - 0; Bacteria - 2; Metazoa - 112; Fungi - 71; Plants - 190; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Protein Annotations
BioGrid:3023eggNOG:ENOG410XU74eggNOG:KOG4249EMBL:AC006593
EMBL:AY085428EMBL:BT025987EMBL:CP002685EnsemblPlants:AT2G31190
EnsemblPlants:AT2G31190.1EnsemblPlants:AT2G31190.2entrez:817675ExpressionAtlas:Q9SJX7
GeneID:817675Genevisible:Q9SJX7GO:GO:0005739GO:GO:0009536
GO:GO:0009926GO:GO:0009941GO:GO:0010224hmmpanther:PTHR12770
hmmpanther:PTHR12770:SF5HOGENOM:HOG000240914InParanoid:Q9SJX7IntAct:Q9SJX7
InterPro:IPR006968KEGG:ath:AT2G31190OMA:RGWYTDQPANTHER:PTHR12770
PaxDb:Q9SJX7Pfam:PF04884Pfam:Q9SJX7PhylomeDB:Q9SJX7
PIR:F84717PRIDE:Q9SJX7PRO:PR:Q9SJX7Proteomes:UP000006548
RefSeq:NP_001189649.1RefSeq:NP_565718.1STRING:3702.AT2G31190.1TAIR:AT2G31190
tair10-symbols:RUS2tair10-symbols:WXR1UniGene:At.38252UniProt:Q9SJX7
Coordinates (TAIR10) chr2:-:13291458..13293681
Molecular Weight (calculated) 48261.30 Da
IEP (calculated) 8.08
GRAVY (calculated) -0.08
Length 433 amino acids
Sequence (TAIR10)
(BLAST)
001: MQFLQEKVKL IKKEDPVMLK SPEDFPVYWF ETSDSVSHRY QFQSDGHLSM KVVDDARPVP QKMVESFLNK FFPSGYPYSV NEGYLRYTQF RALQHFSSAA
101: LSVLSTQSLL FAAGLRPTPA QATVVSWILK DGMQHVGKLI CSNLGARMDS EPKRWRILAD VLYDLGTGLE LVSPLCPHLF LEMAGLGNFA KGMATVAARA
201: TRLPIYSSFA KEGNLSDIFA KGEAISTLFN VAGIGAGIQL ASTICSSMEG KLVVGSILSV VHVYSVVEQM RGVPINTLNP QRTALIVANF LKTGKVPSPP
301: DLRFQEDLMF PERPIQDAGN VKVGRALHKA VKPSEVQRLK QVFVEEKFLL SHGKSWTDMV LEHDATGEDA LRGWLVAAYV KSMTKIYNDP DDIILQDAYD
401: KMNDVFNPFL SQVQAKGWYT DRFLDGTGTR FAW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)