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AT5G56650.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.785
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:24872594 (2014): plastid
  • PMID:22430844 (2012): Golgi
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : IAA-leucine resistant (ILR)-like 1
Curator
Summary (TAIR10)
encodes a protein similar to IAA conjugate hydrolases. Enzyme assays with purified GST-tagged protein shows some activity in vitro but too low to be physiologically significant.
Computational
Description (TAIR10)
IAA-leucine resistant (ILR)-like 1 (ILL1); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like 2 (TAIR:AT5G56660.1); Has 13181 Blast hits to 13171 proteins in 2001 species: Archae - 137; Bacteria - 9700; Metazoa - 62; Fungi - 245; Plants - 308; Viruses - 0; Other Eukaryotes - 2729 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G56650-MONOMERBioGrid:21010EC:3.5.1.-eggNOG:COG1473
eggNOG:ENOG410IIRPEMBL:AB013392EMBL:AF047031EMBL:CP002688
EMBL:U23795EnsemblPlants:AT5G56650EnsemblPlants:AT5G56650.1entrez:835766
ExpressionAtlas:P54969Gene3D:3.30.70.360GeneID:835766Genevisible:P54969
GO:GO:0005788GO:GO:0005794GO:GO:0016787Gramene:AT5G56650.1
gramene_pathway:3.5.1.-gramene_pathway:PWY-1822hmmpanther:PTHR11014hmmpanther:PTHR11014:SF55
HOGENOM:HOG000241403InParanoid:P54969InterPro:IPR002933InterPro:IPR011650
InterPro:IPR017439iPTMnet:P54969KEGG:ath:AT5G56650KO:K14664
MEROPS:M20.A03OMA:GLHNAPEPaxDb:P54969Pfam:P54969
Pfam:PF01546Pfam:PF07687PhylomeDB:P54969PIRSF:PIRSF005962
PRIDE:P54969PRO:PR:P54969PROSITE:PS00014ProteinModelPortal:P54969
Proteomes:UP000006548RefSeq:NP_200476.1SMR:P54969STRING:3702.AT5G56650.1
SUPFAM:SSF53187SUPFAM:SSF55031TAIR:AT5G56650tair10-symbols:ILL1
TIGRfam:TIGR01891TIGRFAMs:TIGR01891UniGene:At.24009UniProt:P54969
UniProt:Q67YZ8
Coordinates (TAIR10) chr5:+:22930825..22932488
Molecular Weight (calculated) 47694.50 Da
IEP (calculated) 6.66
GRAVY (calculated) -0.06
Length 438 amino acids
Sequence (TAIR10)
(BLAST)
001: MALNNFLTFQ LLLLLLRVSS ESPWIVAGDV SRIPINFLEL AKSPEVFDSM VRIRRKIHEN PELGYEEFET SKFIRSELDL IGVKYRFPVA ITGIIGYIGT
101: GEPPFVALRA DMDALPIQEA VEWEHKSKNP GKMHACGHDG HVAMLLGAAK ILQQHRQHLQ GTVVLIFQPA EEGLSGAKMM REEGALKNVE AIFGIHLSPR
201: TPFGKAASLA GSFMAGAGAF EAVITGKGGH AAIPQHTIDP VVAASSIVLS LQHLVSRETD PSDSKVVTVT KVNGGNAFNV IPDSITIGGT LRAFTGFTQL
301: QERIKEIITK QAAVHRCNAS VNLAPNGNQP MPPTVNNMDL YKKFKKVVRD LLGQEAFVEA VPEMGSEDFS YFAETIPGHF SLLGMQDETQ GYASSHSPHY
401: RINEDVLPYG AAIHATMAVQ YLKDKASKGS VSGFHDEL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)