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AT5G56660.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:22923678 (2012): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : IAA-leucine resistant (ILR)-like 2
Curator
Summary (TAIR10)
encodes IAA-amino acid hydrolase that has a broad range of substrate specificity. It is most active on IAA-Ala among the IAA-conjugate hydrolases tested.
Computational
Description (TAIR10)
IAA-leucine resistant (ILR)-like 2 (ILL2); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity, IAA-Ala conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like 1 (TAIR:AT5G56650.1); Has 12923 Blast hits to 12915 proteins in 1981 species: Archae - 133; Bacteria - 9506; Metazoa - 56; Fungi - 252; Plants - 310; Viruses - 0; Other Eukaryotes - 2666 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1473eggNOG:ENOG410IIRPEMBL:BT020494EnsemblPlants:AT5G56660
EnsemblPlants:AT5G56660.1entrez:835767EvolutionaryTrace:P54970ExpressionAtlas:Q5HZ30
Gene3D:3.30.70.360GeneID:835767GO:GO:0016787Gramene:AT5G56660.1
gramene_pathway:3.5.1.-gramene_pathway:PWY-1822hmmpanther:PTHR11014hmmpanther:PTHR11014:SF55
InterPro:IPR002933InterPro:IPR011650InterPro:IPR017439KEGG:ath:AT5G56660
KO:K14664merops:M20.014ncoils:CoilOMA:LFRINLR
PaxDb:Q5HZ30PDBsum:1XMBPDBsum:2Q43Pfam:P54970
Pfam:PF01546Pfam:PF07687PhylomeDB:Q5HZ30PIRSF:PIRSF005962
PRIDE:Q5HZ30PROSITE:PS00014ProteinModelPortal:Q5HZ30RefSeq:NP_200477.1
SMR:Q5HZ30STRING:3702.AT5G56660.1SUPFAM:SSF53187SUPFAM:SSF55031
TAIR:AT5G56660tair10-symbols:ILL2TIGRfam:TIGR01891TIGRFAMs:TIGR01891
UniGene:At.46738UniGene:At.66661UniGene:At.66838UniProt:P54970
UniProt:Q5HZ30
Coordinates (TAIR10) chr5:+:22933278..22935011
Molecular Weight (calculated) 47858.70 Da
IEP (calculated) 6.88
GRAVY (calculated) -0.06
Length 439 amino acids
Sequence (TAIR10)
(BLAST)
001: MALNKLLSLT FQLLLFLLSV SSESPWIAED TSQIQTKLLE FAKSPEVFDW MVKIRRKIHE NPELGYEELE TSKLIRSELE LIGIKYRYPV AITGVIGYIG
101: TGEPPFVALR ADMDALPIQE GVEWEHKSKI AGKMHACGHD GHVTMLLGAA KILHEHRHHL QGTVVLIFQP AEEGLSGAKK MREEGALKNV EAIFGIHLSA
201: RIPFGKAASR AGSFLAGAGV FEAVITGKGG HAAIPQHTID PVVAASSIVL SLQQLVSRET DPLDSKVVTV SKVNGGNAFN VIPDSITIGG TLRAFTGFTQ
301: LQQRVKEVIT KQAAVHRCNA SVNLTPNGRE PMPPTVNNKD LYKQFKKVVR DLLGQEAFVE AAPVMGSEDF SYFAETIPGH FSLLGMQDET NGYASSHSPL
401: YRINEDVLPY GAAIHASMAV QYLKEKASKG SVSGFHEEL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)