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AT5G46260.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.921
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : disease resistance protein (TIR-NBS-LRR class) family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G46270.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:ENOG410IGA8EMBL:AB010698EMBL:CP002688
EnsemblPlants:AT5G46260EnsemblPlants:AT5G46260.1entrez:834668Gene3D:3.40.50.10140
Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:834668GO:GO:0005524
GO:GO:0007165GO:GO:0043531Gramene:AT5G46260.1hmmpanther:PTHR11017
hmmpanther:PTHR11017:SF20HOGENOM:HOG000064702InterPro:IPR000157InterPro:IPR002182
InterPro:IPR003593InterPro:IPR011713InterPro:IPR011991InterPro:IPR027417
InterPro:IPR032675KEGG:ath:AT5G46260OMA:TFELKEWPfam:PF00931
Pfam:PF01582Pfam:PF07725Pfscan:PS50104PhylomeDB:Q9FL35
PROSITE:PS50104Proteomes:UP000006548RefSeq:NP_199438.1SMART:SM00255
SMART:SM00382SMR:Q9FL35STRING:3702.AT5G46260.1SUPFAM:SSF46785
SUPFAM:SSF52058SUPFAM:SSF52200SUPFAM:SSF52540TAIR:AT5G46260
UniGene:At.55401UniProt:Q9FL35
Coordinates (TAIR10) chr5:-:18759102..18763358
Molecular Weight (calculated) 137480.00 Da
IEP (calculated) 7.71
GRAVY (calculated) -0.27
Length 1205 amino acids
Sequence (TAIR10)
(BLAST)
0001: MASSSSSRNW LYDVFLSFRG GDVRVTFRSH FLKEFDRKLI TAFRDNEIER SHSLWPDLEQ AIKESRIAVV VFSKNYASSS WCLNELLEIV NCNDKIIIPV
0101: FYGVDPSQVR YQIGEFGKIF EKTCKRQTEE VKNQWKKALT HVANMLGFDS SKWDDEAKMI EEIANDVLRK LLLTTSKDFE DFVGLEDHIA NMSALLDLES
0201: KEVKMVGIWG SSGIGKTTIA RALFNNLFRH FQVRKFIDRS FAYKSREIHS SANPDDHNMK LHLQESFLSE ILRMPNIKID HLGVLGERLQ HQKVLIIIDD
0301: VDDQVILDSL VGKTQWFGNG SRIIVVTNNK HFLTAHGIDR MYEVSLPTEE HALAMLCQSA FKKKSPPEGF EMLVVQVARY AGSLPLVLKV LGSYLSGKDK
0401: EYWIDMLPRL QNGLNDKIER ILRISYDGLE SEDQAIFRHI ACIFNHMEVT TIKSLLANSI YGANVGLQNL VDKSIIHVRW GHVEMHPLLQ EMGRKIVRTQ
0501: SIGKPRKREF LVDPNDICDV LSEGIDTQKV LGISLETSKI DELCVHESAF KRMRNLRFLK IGTDIFGEEN RLHLPESFDY LPPTLKLLCW SEFPMRCMPS
0601: NFCPKNLVTL KMTNSKLHKL WEGAVPLTCL KEMDLDGSVN LKEIPDLSMA TNLETLNFEN CKSLVELPSF IQNLNKLLKL NMAFCNSLET LPTGFNLKSL
0701: NRIDFTKCSK LRTFPDFSTN ISDLYLTGTN IEELPSNLHL ENLIDLRISK KEIDGKQWEG VMKPLKPLLA MLSPTLTSLQ LQNIPNLVEL PCSFQNLIQL
0801: EVLDITNCRN LETLPTGINL QSLDSLSFKG CSRLRSFPEI STNISSLNLE ETGIEEVPWW IDKFSNLGLL SMDRCSRLKC VSLHISKLKR LGKVDFKDCG
0901: ALTIVDLCGC PIGMEMEANN IDTVSKVKLD FRDCFNLDPE TVLHQESIIF KYMLFPGKEE MPSYFTYRTT GSSSLTIPLL HLPLSQPFFR FRVGALVTNV
1001: KHGKNIKVKC EFKDRFGNSF HVGSDDFYVY LLFTKSQKGS QMLTILDCCI PLNEGNASLA QGNYYDHVDI NIHISSGGWR STFELKEWGI RLLEEDSSSA
1101: ENGLGNPNST LPHVSEAEEG NMGYYTPLQE GLVNEIEHSE ESGDINVGTK RSKKRMRPKK TIWGIHRFKN LLRSRKRMRV SIKNERPLKK SRTRPASIPR
1201: TGRNT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)