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AT5G32470.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Haem oxygenase-like, multi-helical
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Haem oxygenase-like, multi-helical; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C (InterPro:IPR004305); Has 1988 Blast hits to 1985 proteins in 797 species: Archae - 79; Bacteria - 1526; Metazoa - 2; Fungi - 151; Plants - 51; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IG8JeggNOG:ENOG4111Z2YEMBL:AF296831EMBL:AK228760
EMBL:AK230194EMBL:CP002688EnsemblPlants:AT5G32470EnsemblPlants:AT5G32470.1
entrez:833206Gene3D:1.20.910.10Gene3D:3.40.50.1000GeneID:833206
Genevisible:F4KFT7GO:GO:0005739GO:GO:0005829Gramene:AT5G32470.1
hmmpanther:PTHR20858hmmpanther:PTHR20858:SF21InParanoid:F4KFT7InterPro:IPR004305
InterPro:IPR016084InterPro:IPR023214KEGG:ath:AT5G32470OMA:HSNEFAF
PaxDb:F4KFT7Pfam:F4KFT7Pfam:PF03070Pfam:PF12710
PhylomeDB:F4KFT7PRIDE:F4KFT7PRO:PR:F4KFT7ProteinModelPortal:F4KFT7
Proteomes:UP000006548RefSeq:NP_198287.3SMR:F4KFT7SUPFAM:SSF48613
SUPFAM:SSF56784TAIR:AT5G32470UniGene:At.30675UniProt:F4KFT7
Coordinates (TAIR10) chr5:-:12085328..12088569
Molecular Weight (calculated) 68967.10 Da
IEP (calculated) 5.24
GRAVY (calculated) -0.16
Length 617 amino acids
Sequence (TAIR10)
(BLAST)
001: MRFLFPTRLI NNSSLGLLRS PHTTAPIRSL WFRTKSPVFR SATTPIMTAV AFSSSLSIPP TSEEALPGKL WIKFNRECLF SIYSPFAVCL AAGNLKIDTF
101: RQYIAQDVHF LKAFAHAYEL AADCADDDDD KLAISDLRKS VMEELKMHDS FVQDWDLDIN KEVSVNSATL RYTEFLLATA SGKVEGCKAP GMLDTPFEKT
201: KVAAYTLGAV TPCMRLYAFL GKEFGSLLDL SDVNHPYKKW IDNYSSDAFQ ASAKQTEDLL EKLSVSMTGE ELDIIEKLYQ QAMKLEVEFF HAQPLAQPTI
301: VPLLKNHSKD DLVIFSDFDL TCTVVDSSAI LAEIAIVTAP KDEQSRSGQQ IHRMLSSDLK NTWNLLSKQY TEHYEECIES ILNKKKADKF DYEGLCKALE
401: QLSDFEKEAN NRVIESGVLK GLNLEDIKRA GERLILQDGC INVFQKILKT ENLNAELHVL SYCWCGDLIR AAFSAGGVDA VEVHANEFTF EESISTGEIE
501: RKVESPINKA QQFKSILQNR KNENNKKSFL SVYIGDSVGD LLCLLEADIG IVVSSSSSLR RVGSHFGVSF VPLFSGIVQK QKQHTEESSS SAWKGLSGTL
601: YTVSSWAEIH SFALGWE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)