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AT5G18610.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G13160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:CP002688EMBL:DQ446962
EnsemblPlants:AT5G18610EnsemblPlants:AT5G18610.1EnsemblPlants:AT5G18610.2entrez:831979
Gene3D:2.60.120.200GeneID:831979GO:GO:0004674GO:GO:0005524
GO:GO:0005886GO:GO:0045087Gramene:AT5G18610.1Gramene:AT5G18610.2
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF100InterPro:IPR000719InterPro:IPR008271
InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441KEGG:ath:AT5G18610
OMA:ATHKNSPPfam:PF00069Pfscan:PS50011PhylomeDB:Q1PDV6
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011Proteomes:UP000006548
Reactome:R-ATH-450302Reactome:R-ATH-450321RefSeq:NP_001190331.1RefSeq:NP_197362.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q1PDV6
STRING:3702.AT5G18610.1SUPFAM:SSF56112SwissPalm:Q1PDV6TAIR:AT5G18610
UniGene:At.54903UniProt:Q1PDV6
Coordinates (TAIR10) chr5:+:6192736..6195371
Molecular Weight (calculated) 55934.00 Da
IEP (calculated) 9.42
GRAVY (calculated) -0.62
Length 513 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGCLPCFGS SAKDAASKDS VKKELSAKDG SVTQSHHISL DKSKSRRGPE QKKELTAPKE GPTAHIAAQT FTFRELAAAT KNFRPECLLG EGGFGRVYKG
101: RLETTGQIVA VKQLDRNGLQ GNREFLVEVL MLSLLHHPNL VNLIGYCADG DQRLLVYEYM PLGSLEDHLH DLPPDKEPLD WSTRMTIAAG AAKGLEYLHD
201: KANPPVIYRD LKSSNILLGD GYHPKLSDFG LAKLGPVGDK THVSTRVMGT YGYCAPEYAM TGQLTLKSDV YSFGVVFLEL ITGRKAIDNA RAPGEHNLVA
301: WARPLFKDRR KFPKMADPSL QGRYPMRGLY QALAVAAMCL QEQAATRPLI GDVVTALTYL ASQTFDPNAP SGQNSRSGSG PPFIRTRDDR RSLGDGSSLD
401: SPAETRSRLG SPATHKNSPD YRRRDMVREV NAGSEGGSET GGGSGRKWGL SDLEGQESQR GSPASVGRSS RGTPRNRDLD RERAVAEAKV WGENWRERKR
501: ATNGPGSFDS TND
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)