AT5G18190.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.999 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : Protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G03940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr5:-:6010215..6013724 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 76989.10 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.09 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.43 | ||||||||||||||||||||||||||||||||||||||||
Length | 691 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MPELRSGARR LRQPSPQVTG QADNIELPPQ PVTRRRGGGG RGRGNAKGAA PPRPAGGVGR GRGIRLIDLE AEPCEVRPAV GEPAFNQVEA VAEKDIAMEG 101: GSAEKVVGVE EDSSTAPVPE RVQVGNSPVY KTERKLGKGG FGQVFVGRRV SGGSDRIGAD AIEVALKFEH RNSKGCNFGP PYEWQVYNTL NGCYGVPAVH 201: HKGRQGDFYI LVMDMLGPSL WDVWNSSGQS MSPNMVACIA VESISILEKL HMKGFVHGDV KPENFLLGQP GTADEKKLYL IDLGLASKWK DSHSGQHVEY 301: DQRPDVFRGT IRYASVHAHL GRTGSRRDDL ESLAYTLIFL LKGRLPWQGY QGDNKSFLVC KKKMSTSPEL MCCFCPPPFK LFLEAVTNMK FDEEPNYAKL 401: ISIFDSLIEQ CALSRPIKID GALKVGQKRG RMLLNLDEDE QPKKKIRIGS PACQWISVYN ARRPMKQRYH YNVADSRLHQ HVQKGNEDGL LISCVASAAN 501: LWALIMDAGT GFTSQVYELS TVFLHKDWIM EQWEKNYYIS SIAGSDNGNS LVVMSKGTSY TQQSYKVSDS FPFKWINKKW KEDFHVTSMT TAGNRWGVVM 601: SRNSGYSDQV VELDFLYPSD GIHRRWESGY RITSMAATAD QAAFILSVPK RKMMDETQET LRTTAFPSTH VKEKWAKNLY IASICFGRTV C |
||||||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)