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AT5G18190.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G03940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G18190-MONOMEReggNOG:ENOG410XPGPeggNOG:KOG1164EMBL:AB012246
EMBL:CP002688EnsemblPlants:AT5G18190EnsemblPlants:AT5G18190.1entrez:831937
GeneID:831937GO:GO:0004674GO:GO:0005524Gramene:AT5G18190.1
hmmpanther:PTHR11909hmmpanther:PTHR11909:SF131HOGENOM:HOG000240486InterPro:IPR000719
InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT5G18190
OMA:FILVMDIPfam:PF00069Pfscan:PS50011PhylomeDB:Q9FK52
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011Proteomes:UP000006548
RefSeq:NP_197320.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q9FK52STRING:3702.AT5G18190.1SUPFAM:SSF56112TAIR:AT5G18190
UniGene:At.28059UniProt:Q9FK52
Coordinates (TAIR10) chr5:-:6010215..6013724
Molecular Weight (calculated) 76989.10 Da
IEP (calculated) 9.09
GRAVY (calculated) -0.43
Length 691 amino acids
Sequence (TAIR10)
(BLAST)
001: MPELRSGARR LRQPSPQVTG QADNIELPPQ PVTRRRGGGG RGRGNAKGAA PPRPAGGVGR GRGIRLIDLE AEPCEVRPAV GEPAFNQVEA VAEKDIAMEG
101: GSAEKVVGVE EDSSTAPVPE RVQVGNSPVY KTERKLGKGG FGQVFVGRRV SGGSDRIGAD AIEVALKFEH RNSKGCNFGP PYEWQVYNTL NGCYGVPAVH
201: HKGRQGDFYI LVMDMLGPSL WDVWNSSGQS MSPNMVACIA VESISILEKL HMKGFVHGDV KPENFLLGQP GTADEKKLYL IDLGLASKWK DSHSGQHVEY
301: DQRPDVFRGT IRYASVHAHL GRTGSRRDDL ESLAYTLIFL LKGRLPWQGY QGDNKSFLVC KKKMSTSPEL MCCFCPPPFK LFLEAVTNMK FDEEPNYAKL
401: ISIFDSLIEQ CALSRPIKID GALKVGQKRG RMLLNLDEDE QPKKKIRIGS PACQWISVYN ARRPMKQRYH YNVADSRLHQ HVQKGNEDGL LISCVASAAN
501: LWALIMDAGT GFTSQVYELS TVFLHKDWIM EQWEKNYYIS SIAGSDNGNS LVVMSKGTSY TQQSYKVSDS FPFKWINKKW KEDFHVTSMT TAGNRWGVVM
601: SRNSGYSDQV VELDFLYPSD GIHRRWESGY RITSMAATAD QAAFILSVPK RKMMDETQET LRTTAFPSTH VKEKWAKNLY IASICFGRTV C
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)