AT5G14850.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.602 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Alg9-like mannosyltransferase family | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Alg9-like mannosyltransferase family; FUNCTIONS IN: mannosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: GPI anchor biosynthetic process, GPI anchor metabolic process; LOCATED IN: endoplasmic reticulum membrane, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:4802099..4804977 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 62704.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.02 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.17 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 548 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDIRKRKNAG GDGDGGADGA SVNVGDEPDS FGGRIGSPRR IFLFCLAFRV VNALLIQTYF NPDEHWQSLE VAHRTIFGYG YMTWEWKRGI RSYLHPMLFA 101: FLYKLLQVTG LDTPYIMIKA PRLMQSIFSA IGDLYLYKLS DALYGGNVAT WSLFCQMANW FIFFCLNRTF SNCLETVLTI MGLYYWPCIR DSSIDYPVNR 201: KWGLVIAALA CAIRPTSAVI WLYVGMLELF LTPNKVKFII LEVIPIGSLV LGFTCLLDRL MYGSWVIVPL NFLKFNFLSS GGDYYGTHPW HWYFTQGFLV 301: MLFTFTPFSI AGIIKSKNQK LSALILWVLA IYSILGHKEF RFVLPVLPIA LIFSGYAFAQ MEVSGSSSSS SVTKKKQVPR QNHTKWSPKL RLSVYFLLAT 401: NIPMALYMSL FHQRGTEDAM NYLSDEAYKG RVKSILFLMP CHSTPYYSTL HRNIPMQFLD CTPSAEKGEL DESDQFLVNP LGFASELARN WSEPPSHIVL 501: FASEETKLRD FMIQHSFKEV RRFFHAHFKV DRDLQSSVVV YVVNHAFP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)