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AT5G03630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24727099 (2014): mitochondrion
  • PMID:24124904 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21166475 (2011): cytosol
  • PMID:20061580 (2010): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Pyridine nucleotide-disulphide oxidoreductase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATMDAR2; FUNCTIONS IN: monodehydroascorbate reductase (NADH) activity; INVOLVED IN: response to cadmium ion, response to zinc ion, response to salt stress; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: monodehydroascorbate reductase 1 (TAIR:AT3G52880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G03630-MONOMEREC:1.6.5.4eggNOG:COG0446eggNOG:KOG1336
EMBL:AF428317EMBL:AK227165EMBL:AL162506EMBL:AY057628
EMBL:AY087318EMBL:AY142000EMBL:CP002688EnsemblPlants:AT5G03630
EnsemblPlants:AT5G03630.1entrez:831774ExpressionAtlas:Q93WJ8Gene3D:3.50.50.60
GeneID:831774Genevisible:Q93WJ8GO:GO:0005829GO:GO:0009570
GO:GO:0009651GO:GO:0010043GO:GO:0016656GO:GO:0046686
GO:GO:0050660Gramene:AT5G03630.1gramene_pathway:1.6.5.4gramene_pathway:PWY-2261
hmmpanther:PTHR22912hmmpanther:PTHR22912:SF144HOGENOM:HOG000276711InParanoid:Q93WJ8
IntAct:Q93WJ8InterPro:IPR016156InterPro:IPR023753iPTMnet:Q93WJ8
KEGG:ath:AT5G03630KO:K08232OMA:ECRRALQPaxDb:Q93WJ8
Pfam:PF07992Pfam:Q93WJ8PhylomeDB:Q93WJ8PIR:T48390
PRIDE:Q93WJ8PRO:PR:Q93WJ8ProteinModelPortal:Q93WJ8Proteomes:UP000006548
RefSeq:NP_568125.1SMR:Q93WJ8STRING:3702.AT5G03630.1SUPFAM:SSF51905
SUPFAM:SSF55424TAIR:AT5G03630tair10-symbols:ATMDAR2UniGene:At.33250
UniGene:At.4763UniProt:Q0WUJ1UniProt:Q93WJ8
Coordinates (TAIR10) chr5:-:922378..924616
Molecular Weight (calculated) 47482.50 Da
IEP (calculated) 4.97
GRAVY (calculated) -0.18
Length 435 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEEKSFKYV IVGGGVAAGY AAREFFNQGV KPGELAIISR EQVPPYERPA LSKGYIHLEN KATLPNFYVA AGIGGERQFP QWYKEKGIEL ILGTEIVKAD
101: LAAKTLVSGT GQVFKYQTLL AATGSSVIRL SDFGVPGADA KNIFYLRELE DADYLAYAME TKEKGKAVVV GGGYIGLELG AALKANNLDV TMVYPEPWCM
201: PRLFTAGIAS FYEGYYANKG INIVKGTVAS GFTTNSNGEV TEVKLKDGRT LEADIVIVGV GGRPIISLFK DQVEEEKGGL KTDGFFKTSL PDVYAIGDVA
301: TFPMKLYNEM RRVEHVDHAR KSAEQAVKAI KAAEEGNSIP EYDYLPYFYS RAFDLSWQFY GDNVGESVLF GDNDPESPKP KFGSYWIKER KVVGAFLEGG
401: SPEENNAIAK LARAQPSVES LEVLSKEGLS FATNI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)