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AT5G03390.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF295)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF295); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G68960.1); Has 276 Blast hits to 270 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 276; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JU4QeggNOG:ENOG411077MEMBL:AL162751EMBL:AY140024
EMBL:BT008454EMBL:CP002688EnsemblPlants:AT5G03390EnsemblPlants:AT5G03390.1
entrez:831852GeneID:831852GO:GO:0009507Gramene:AT5G03390.1
hmmpanther:PTHR31681hmmpanther:PTHR31681:SF3HOGENOM:HOG000124789InterPro:IPR005174
KEGG:ath:AT5G03390OMA:DSAWTRIPfam:PF03478PhylomeDB:Q9LZF0
PIR:T48361Proteomes:UP000006548RefSeq:NP_195959.1TAIR:AT5G03390
UniGene:At.27840UniProt:Q9LZF0
Coordinates (TAIR10) chr5:+:835260..836609
Molecular Weight (calculated) 42142.10 Da
IEP (calculated) 8.58
GRAVY (calculated) -0.34
Length 373 amino acids
Sequence (TAIR10)
(BLAST)
001: MSQLLGRTAK ISSVVKKQRL CFSELRSFST AATPYLLLKD TNYRAASGGS VVDINLYDPR KKEIVKIRDQ YLSEELQCTM KMGSSRGWIV AKTIYEPTLY
101: LTNIFNPCAS VSSHKVFNLP PLEDDAKARI SSISLSASPN QQDCVLAVKS SSSPFLSLWR PGDSAWTRIK VPFPASNVMM YSGRDRKFYL LPRESKEECE
201: GPIDLINTSS DDFPQVTLYQ RFPNSDIPVS RQEQLLSSIK TRYLVESPSG DSFIVYWCNE RSFYWKKGEV KPWTGKNPPP SRISCRLKTR TFVVFRQDSE
301: QGIGSYTEDI GDLCIFLGHR EAFCVSATEY PGLRPNSVYY ATSGTGFGYY DLSSNTLHDV IHEGLFSWIA PLQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)