AT5G03380.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Heavy metal transport/detoxification superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT2G36950.1); Has 4632 Blast hits to 3385 proteins in 434 species: Archae - 9; Bacteria - 451; Metazoa - 988; Fungi - 256; Plants - 2406; Viruses - 0; Other Eukaryotes - 522 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:832400..834301 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42265.40 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.14 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.91 | ||||||||||||||||||||||||||||||||||||
| Length | 392 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGEKKEETAT KPQGEKKPTD GGITTVVMKL DMHCEGCGKK IKRIFKHFKG VEDVKIDYKS NKLTVIGNVD PVEVRDKVAD KIKRPVELVS TVAPPKKETP 101: PSSGGAEKKP SPAAEEKPAE KKPAAVEKPG EKKEEKKKEE GEKKASPPPP PKESTVVLKT KLHCEGCEHK IKRIVNKIKG VNSVAIDSAK DLVIVKGIID 201: VKQLTPYLNE KLKRTVEVVP AKKDDGAPVA AAAAAPAGGE KKDKVAGEKK EIKDVGEKKV DGGGEKKKEV AVGGGGGGGG GGGDGGAMDV KKSEYNGYGY 301: PPQPMYYYPE GQVYGQQHYM MQGQSSQSYV QEPYSNQGYV QESYMNQGYG QGYGQEAPPP PYMNQQGYAD PYGHMRAPEL FSDENPNGCS VM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)