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AT5G51460.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.951
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Curator
Summary (TAIR10)
homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatases
Computational
Description (TAIR10)
ATTPPA; FUNCTIONS IN: trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G22590.1); Has 2270 Blast hits to 2264 proteins in 824 species: Archae - 41; Bacteria - 1326; Metazoa - 220; Fungi - 150; Plants - 424; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-681-MONOMEREC:3.1.3.12eggNOG:COG1877eggNOG:ENOG410IMM9
EMBL:AB018109EMBL:AF007778EMBL:AY093147EMBL:BT008467
EMBL:CP002688EnsemblPlants:AT5G51460EnsemblPlants:AT5G51460.1EnsemblPlants:AT5G51460.3
entrez:835220ExpressionAtlas:O64896Gene3D:3.40.50.1000GeneID:835220
Genevisible:O64896GO:GO:0004805GO:GO:0005992GO:GO:0016311
gramene_pathway:3.1.3.12gramene_pathway:TRESYN-PWYgramene_plant_reactome:1119516gramene_plant_reactome:6876622
hmmpanther:PTHR10788hmmpanther:PTHR10788:SF38HOGENOM:HOG000239289InParanoid:O64896
InterPro:IPR003337InterPro:IPR006379InterPro:IPR023214iPTMnet:O64896
KEGG:ath:AT5G51460KO:K01087OMA:CGWLDAMPaxDb:O64896
Pfam:O64896Pfam:PF02358PhylomeDB:O64896PIR:T52057
PRIDE:O64896PRO:PR:O64896ProteinModelPortal:O64896Proteomes:UP000006548
RefSeq:NP_199959.2RefSeq:NP_851171.1RefSeq:NP_974922.1SMR:O64896
STRING:3702.AT5G51460.1SUPFAM:SSF56784TAIR:AT5G51460tair10-symbols:ATTPPA
TIGRfam:TIGR00685TIGRfam:TIGR01484TIGRFAMs:TIGR00685TIGRFAMs:TIGR01484
UniGene:At.7801UniPathway:UPA00299UniProt:O64896
Coordinates (TAIR10) chr5:+:20902266..20904292
Molecular Weight (calculated) 43194.60 Da
IEP (calculated) 6.63
GRAVY (calculated) -0.34
Length 385 amino acids
Sequence (TAIR10)
(BLAST)
001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMQL
101: KYPSALTSFE KIMSFAKGKR IALFLDYDGT LSPIVEEPDC AYMSSAMRSA VQNVAKYFPT AIISGRSRDK VYEFVNLSEL YYAGSHGMDI MSPAGESLNH
201: EHSRTVSVYE QGKDVNLFQP ASEFLPMIDK VLCSLIESTK DIKGVKVEDN KFCISVHYRN VEEKNWTLVA QCVDDVIRTY PKLRLTHGRK VLEIRPVIDW
301: DKGKAVTFLL ESLGLNNCED VLPIYVGDDR TDEDAFKVLR DGPNHGYGIL VSAVPKDSNA FYSLRDPSEV MEFLKSLVTW KRSMG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)