AT3G26700.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G79620.1); Has 92372 Blast hits to 91537 proteins in 3916 species: Archae - 61; Bacteria - 9295; Metazoa - 35380; Fungi - 6696; Plants - 28617; Viruses - 208; Other Eukaryotes - 12115 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:9810669..9812356 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41781.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.52 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.01 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 380 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSAILAAAIG GAVGALALIA LFVFLLWFCV FRRKNLSRTS ETGSSDPSTQ EGRNVAIELS MREARRFEME ELAQATKSFT NKSLIGIGKF GEVYKGLLQD 101: GVLVAIKKRP GLPTQEFVNE VRYLSSIHHR NLVTLLGFCQ ESNTQFLVYE YVPNGSVSSH LYGAGGKVPG NRLEFRHRLA ISIGAAKGLA HLHSLSPRLI 201: HKDFKTANVL VDENFIAKVA DAGVRNFLGR EDVGTSSHIV ADQIFLSPEV QEFKRFSEKS DVYAFGVFLL ELVSGREASE PSPSSSTQTL VDWMQNLTDY 301: ADIPMMIDER LGGTYTAEGV EELITLTLRC VDVSSEKRPT MSFVVTELER ILDKEVSLTT VMGEGTPTVT LGSQLFKATK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)