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AT1G23480.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.557
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cellulose synthase-like A3
Curator
Summary (TAIR10)
encodes a gene similar to cellulose synthase
Computational
Description (TAIR10)
cellulose synthase-like A3 (CSLA03); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G13410.1); Has 4758 Blast hits to 4752 proteins in 1373 species: Archae - 199; Bacteria - 3673; Metazoa - 9; Fungi - 91; Plants - 500; Viruses - 11; Other Eukaryotes - 275 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G23480-MONOMERBioCyc:ARA:GQT-2680-MONOMERBioCyc:ARA:GQT-2681-MONOMERCAZy:GT2
EC:2.4.1.-eggNOG:COG1215eggNOG:ENOG410JTIPEMBL:AC005990
EMBL:AC007945EMBL:AY099769EMBL:BT000203EMBL:CP002684
EnsemblPlants:AT1G23480EnsemblPlants:AT1G23480.1EnsemblPlants:AT1G23480.2entrez:838956
ExpressionAtlas:Q9LQC9Gene3D:3.90.550.10GeneID:838956Genevisible:Q9LQC9
GO:GO:0000139GO:GO:0016021GO:GO:0016757GO:GO:0071555
hmmpanther:PTHR32044hmmpanther:PTHR32044:SF10HOGENOM:HOG000238309InParanoid:Q9LQC9
InterPro:IPR029044KEGG:ath:AT1G23480OMA:LANTNYPPaxDb:Q9LQC9
Pfam:PF13641Pfam:Q9LQC9PhylomeDB:Q9LQC9PIR:D86368
PRO:PR:Q9LQC9ProteinModelPortal:Q9LQC9Proteomes:UP000006548RefSeq:NP_001031084.1
RefSeq:NP_173762.4RefSeq:NP_850952.1SMR:Q9LQC9STRING:3702.AT1G23480.1
SUPFAM:SSF53448TAIR:AT1G23480tair10-symbols:ATCSLA03tair10-symbols:ATCSLA3
tair10-symbols:CSLA03tair10-symbols:CSLA3TMHMM:TMhelixUniGene:At.41547
UniProt:Q9LQC9UniProt:W8Q7B4
Coordinates (TAIR10) chr1:+:8333917..8336230
Molecular Weight (calculated) 64405.10 Da
IEP (calculated) 8.50
GRAVY (calculated) 0.22
Length 556 amino acids
Sequence (TAIR10)
(BLAST)
001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)