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AT3G56000.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.634
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cellulose synthase like A14
Curator
Summary (TAIR10)
encodes a gene similar to cellulose synthase
Computational
Description (TAIR10)
cellulose synthase like A14 (CSLA14); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A3 (TAIR:AT1G23480.2); Has 4532 Blast hits to 4528 proteins in 1325 species: Archae - 200; Bacteria - 3460; Metazoa - 7; Fungi - 93; Plants - 478; Viruses - 11; Other Eukaryotes - 283 (source: NCBI BLink).
Protein Annotations
EC:2.4.1.-eggNOG:COG1215eggNOG:ENOG410JWU7EMBL:BT004569
EMBL:CP002686EMBL:KJ138786EnsemblPlants:AT3G56000EnsemblPlants:AT3G56000.1
entrez:824766ExpressionAtlas:Q84W06ExpressionAtlas:W8PV95Gene3D:3.90.550.10
GeneID:824766GO:GO:0016021GO:GO:0016740GO:GO:0016757
Gramene:AT3G56000.1hmmpanther:PTHR32044hmmpanther:PTHR32044:SF10HOGENOM:HOG000238309
InterPro:IPR029044KEGG:ath:AT3G56000OMA:NADECCMPaxDb:W8PV95
Pfam:PF13641Pfam:Q84W06ProteinModelPortal:W8PV95Proteomes:UP000006548
RefSeq:NP_191159.2SMR:Q84W06SMR:W8PV95STRING:3702.AT3G56000.1
SUPFAM:SSF53448TAIR:AT3G56000tair10-symbols:ATCSLA14tair10-symbols:CSLA14
TMHMM:TMhelixUniGene:At.34971UniProt:Q84W06UniProt:W8PV95
Coordinates (TAIR10) chr3:-:20783462..20785684
Molecular Weight (calculated) 61486.30 Da
IEP (calculated) 6.71
GRAVY (calculated) 0.22
Length 535 amino acids
Sequence (TAIR10)
(BLAST)
001: MATLSDGLFD DMSVLGVIGY VLEQTRFIFL VPILKRLVNL CQVVSVLLFV DAAYMAIVVA IVKLLGRTPQ KVLKWESFKS DDIELAPSSN HPMVLIQIPI
101: FNEKEVCQLS IGAACKLSWP LDRMIIQVLD DSTEEESQKL VRLECKKWES EGITIKSEVR GGFREGFKAG ALTAGMKHSY VDEYKCEFVV IFDADFQPEP
201: DFLERTVPFL VHNPEIALVQ AGWKYGNADE CCMTRIQEMS LNYHFAVEQK SGSSILGFFG FNGTAGVWRI KALNEAEGWK DRTIVEDMDL AVRAYLRGSK
301: FVYVDDVKVK NELPSSFQAY RFQQHRWSCG PANLFKKIAM EIIKNQNVSL WKKVYLIYNF FFLRKIVVHI FTFVFYCVIL PATVIFPEIE VPKWTTIYIP
401: ATITILNAIA TPKSFYLILY WILFENVMAM HRSIGTLIGL LETSRVKEWI VTQKLGESNN LRENLIFPDH YSFPERLRWR EIMVGMYLFI CGYYDFVFGR
501: TYLYVYLFLQ SIAFFVVGVG YVGMPVPSTP VQTSE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)