AT2G17550.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 264 Blast hits to 258 proteins in 65 species: Archae - 5; Bacteria - 5; Metazoa - 66; Fungi - 16; Plants - 107; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:7634495..7637212 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 89074.60 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.63 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.77 | ||||||||||||||||||||||||||||
| Length | 779 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGGLLHLFDF HNNSFSRKVF SHHKNRDEDL EAPRNSFELQ VDNFHTYHNG KDKPSNGFEE EEWYERSCYP IEESMKKKII EELSKRSNDK QNTPSLVAKL 101: MGMDALPLES VKSSSAWIYP RQSKVNRFDD EKGGRRSRKG RLSSAVTALD VMETPMRREH PQEEELQRFR REFEAWQADK RFKDCSRIVD SGCVVARDEN 201: KERLFTRTRS FGRDFTLKSD RTAPTRIVVL RPGLQRAYDY EDSLTTSSGT TMEGSRGSSI EEFLEEVKER LKGELQGKAA LKRSSSVRGS GIETPFSERP 301: SPRSESMRSY AVSEVQCNAP DSPTEFISRD TRKLLAERLK NVLRKEMTPS HDSVTKSSSR LRPTVSDAAK QAEEINQEDV SKKESLSPRN LKRSLSAPVS 401: GTSFGKLLLE DRHVLTGAQI MRKHEATITE REETESETEP VVVDPIRRKE RFNLRKKVSS FRSTLRGRIF GKKIRSMIES NSFEDESIKD FVTGSKFNNF 501: YDRNENSTEV PPSPASVCSS TPEEFWRNVD YLSQVSTPDV TVSDENGMPQ VFRDISSNLS ELRRQINELE SEVQVRTPVE EEPIQEIETI VDLGNPDKVF 601: VRDLLVASGL YEGTSDISLS RWDPLAKLIK KSVLEETKEN LKKRSNQNQE DDDTGETTIS EENHNILFDL LNEVLTVVLG PLTKSGFKNK LLSSSVSEST 701: TIRGKYLLES TWKIMSEYLY SQPERPFCSL DGIIGWDMDR FPWSALIGEE VNVLGKEVEG MIMADLVEEL VKDLRRQIC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)