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AT4G23870.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11020.1); Has 12 Blast hits to 12 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JWG7eggNOG:ENOG41104YHEMBL:AL078468EMBL:AL161560
EMBL:AY054538EMBL:BT002180EMBL:CP002687EnsemblPlants:AT4G23870
EnsemblPlants:AT4G23870.1entrez:828486GeneID:828486Gramene:AT4G23870.1
HOGENOM:HOG000153520KEGG:ath:AT4G23870ncoils:CoilOMA:TEWPEET
PhylomeDB:Q9T0A2PIR:T08906Proteomes:UP000006548RefSeq:NP_194118.1
STRING:3702.AT4G23870.1TAIR:AT4G23870UniGene:At.47440UniGene:At.49742
UniProt:Q9T0A2
Coordinates (TAIR10) chr4:+:12414409..12414759
Molecular Weight (calculated) 13433.00 Da
IEP (calculated) 5.46
GRAVY (calculated) -0.96
Length 116 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNCLMGGNN VEKMVKEEEV MKKEYKRKDR KVKIVLRRDE LEKLILFQLN ANGNVDGKGE TTLASFGDFL RELEAERSAG EAAAKAAEEE EESRRRCRKW
101: RPSLERITEW PEETLS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)