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AT2G40095.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Alpha/beta hydrolase related protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Alpha/beta hydrolase related protein; CONTAINS InterPro DOMAIN/s: MENTAL domain (InterPro:IPR019498); BEST Arabidopsis thaliana protein match is: Alpha/beta hydrolase related protein (TAIR:AT3G55880.2); Has 87 Blast hits to 87 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0596eggNOG:KOG1454EMBL:AK117275EMBL:BT006212
EMBL:CP002685EnsemblPlants:AT2G40095EnsemblPlants:AT2G40095.1entrez:818598
GeneID:818598GO:GO:0016021GO:GO:0016787Gramene:AT2G40095.1
hmmpanther:PTHR34953hmmpanther:PTHR34953:SF1HOGENOM:HOG000239678KEGG:ath:AT2G40095
OMA:YPRYQKIPhylomeDB:Q8GZ10Proteomes:UP000006548RefSeq:NP_850325.1
STRING:3702.AT2G40095.1TAIR:AT2G40095TMHMM:TMhelixUniGene:At.45683
UniProt:Q8GZ10
Coordinates (TAIR10) chr2:+:16743107..16744455
Molecular Weight (calculated) 23296.00 Da
IEP (calculated) 9.88
GRAVY (calculated) 0.54
Length 209 amino acids
Sequence (TAIR10)
(BLAST)
001: MGFSKEEISK TRKLWSSLWR GIKTIFVLFT MFFSFLLVSA PIFLAVADAL LPSALLHRFS SPATLSSHLT NYDFRHSLID IPLISIIRSA VILCVYGLCD
101: GPKLSRGPYL TITMICSISS LIYVSLKAAF VFGEPAIGDG GGNYFRAAEV ALFLCSSVLA IGHIVVAYRT SCRERKKLLV FKIDIEAVSA CKNVYPRYQK
201: ILLQQERLK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)