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AT1G24150.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.835
What is SUBAcon?
Predictors External Curations
AmiGO : plasma membrane 16313636
SwissProt : plasma membrane 16381842
TAIR : plasma membrane 17317660
TAIR : plasma membrane 16313636
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : formin homologue 4
Curator
Summary (TAIR10)
Encodes a group I formin. Localized to cell junctions. Polymerizes actin. Binds profilin.
Computational
Description (TAIR10)
formin homologue 4 (FH4); FUNCTIONS IN: actin binding, protein binding; INVOLVED IN: actin filament polymerization; LOCATED IN: cell-cell junction, plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin 8 (TAIR:AT1G70140.1); Has 28239 Blast hits to 15205 proteins in 945 species: Archae - 44; Bacteria - 3418; Metazoa - 10057; Fungi - 3019; Plants - 7022; Viruses - 1317; Other Eukaryotes - 3362 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT1G24150EnsemblPlants:AT1G24150.1entrez:839028ncoils:Coil
Pfam:PF02181Pfscan:PS51444SUPFAM:SSF101447tair10-symbols:ATFH4
tair10-symbols:FH4TMHMM:TMhelix
Coordinates (TAIR10) chr1:+:8549518..8551910
Molecular Weight (calculated) 80059.40 Da
IEP (calculated) 9.68
GRAVY (calculated) -0.49
Length 725 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAMLMQPWP PFLPHLTLVF LTLILFFPNQ SFSQSDSPRN IETFFPNDTI TPPVQSPVLS PPQNPSSSSS DSDRGNILRA VLITAASTLL VAAVFFFLVH
101: KCRRRRNRVG GVDNTLQPPV PPLAEAALAR EGFTRFGGNV KGLILDENGL DVLYWRKLQQ SQRDNKGGSF RKEIIHGDDE EKNVIYSKSK KKSGPVTETP
201: LLRGRSSTSH SVIHNDNYRN ATTTHPPHVK TDSFEFVKPD PTPPPPPPPP IPVKQSATPP PPPPPKLKNN GPSPPPPPPL KKTAALSSSA SKKPPPAPRG
301: SSSGESSNGQ VKLKPLHWDK VNPDSDHSMV WDKIDRGSFS FDGDLMEALF GYVAVGKKSP DDGGDKKPSS ASPAQIFILD PRKSQNTAIV LKSLGMTRDE
401: LVESLMEGHD FHPDTLERLS RIAPTKEEQS AILQFDGDTK MLADAESFLF HLLKAVPCAF TRLNALLFRA NYYPEISNHN KNLQTLDLAC TELRSRGLFS
501: VDGKTTLLNF VVEEVVRSEG KRCVLNRRTN RSFSRSSSSS ISEVISKEEQ EKEYLRLGLP VVGGLSSEFT NVKKAAAVDY DTVAATCLAL TSRAKDARRV
601: LAQSEGDNKE GVRFVKKMNE FLDSVEEEVK LAKEEEKKVL ELVKRTTEYY QAGAVKGKNP LHLFVIVRDF LAMVDKVCVE IARNLQRRSS MGSTQQRNAV
701: KFPVLPPNFM SDRSRSDSGG SDSDM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)