AT5G01510.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.976 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function, DUF647 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ROOT UV-B SENSITIVE 5 (RUS5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 426 Blast hits to 424 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 111; Fungi - 69; Plants - 183; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:201702..205151 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57616.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.15 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||
| Length | 509 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MYCTLRFPLP LHIPQTRTMT SCQPKRRRVE HLRCSAQPSS IREDDEDADD RRVGVERRIS IVVERYGNGT SKRYFLDDDD SPLQGILEER ETKPDNNSQS 101: SNSSETNILW LPDVVRDFVF PSGFPGSVSD DYLDYMLWQF PTNITGWICN VLVTSSLLKA VGVGSFSGTS AAATAAASAA AIRWVSKDGI GALGRLLIGG 201: RFGSLFDDDP KQWRMYADFI GSAGSFFDLA TQLYPSQFLL LASTGNLAKA VARGLRDPSF RVIQNHFAIS GNLGEVAAKE EVWEVAAQLI GLGFGILIID 301: TPGLVKSFPF VLLTWTSIRL VHLWLRYQSL AVLQFNTVNL KRARIIVESH VVHSVVPGYV DCNKRENILL WQRFMKPRII FGVSLEELSG LEKSVSKVKA 401: LLKMYTKEKY ILTLNKLNKD TEFSVSFKVN ATSRDVLRCL WQAYWLEENM EESFKDKDSV FHWLKQSLSE MDNKFDDFLF KLDTAGWNLR ESNLKVPNQV 501: LIDQESIPF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)