AT2G32410.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : AXR1-like | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
AXR1-like (AXL); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: auxin homeostasis, auxin mediated signaling pathway, post-embryonic development, protein ubiquitination; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G05180.1); Has 6613 Blast hits to 5967 proteins in 1376 species: Archae - 160; Bacteria - 2652; Metazoa - 1238; Fungi - 918; Plants - 479; Viruses - 0; Other Eukaryotes - 1166 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:13757702..13760862 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57944.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.99 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||
| Length | 523 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAEPKTKYDR QLRIWGELGQ SALETASICL LNCGPTGSEA LKNLVIGGIG SITIVDGSKV EIGDLGNNFM VDAKSVGQSR AKTVCGFLQE LNDSVKANFV 101: EENPDTLIST DPSFFSQFTL VIATQLVEDS MVKLDRICRE ANVMLVLARS YGLTGFVRIS VKEHTAIETK PDHSLDDLRL NSPWPELKSY VESIDLNVEE 201: PAAHKHIPYV VILVKVAEEW AQHHSGNLPS TREEKNEFKD LVKSKMVSAD EENYKEALLA AFKVFAPTGI SQEIQDINHD SCAEVGSNSS DFWVMVAALK 301: EFISNEGGGE VPLEGSMPDM ISSTEHYINL QKIYHSKAEA DFLSMEQRVK SILVKVGQDP SSISKPTIKS FCKNARKLKV CRYRTIEDEF KSPSTTELHK 401: YLADENYSGA IGFYILLRAV DRFAGTYKKF PGQFDGSTDE DASQLKTIAL SLLSEMGCDG YELQEELYNE MCRFGAAEIH VVAALIGGIT SQEVIKLITK 501: QFVPKRGTFI FNGIDHKSQS LTL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)