AT4G37030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.846 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12680.1); Has 101 Blast hits to 99 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:17452150..17454629 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 63340.80 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.58 | ||||||||||||||||||||||||
| GRAVY (calculated) | 0.38 | ||||||||||||||||||||||||
| Length | 569 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAVVVTNLGS CLKISYVIFA FCSAFFLGAI KGLIVGPIAG LTLIVGNVGV ILCLFPAHVT WTIYAVAKTN RFDIPLKVAI LVALPALFGI WLGLSLAISV 101: LVGVGYGFFT PWISAFEAFR QDTESNKFFH CLVDGTWGTI KGSCIVVTDF ADFCYHSYPL YLKELRESPV SDELQTLRLI HVPGCIIVGI LGLVIDIPLF 201: TAIAVIKSPY LLLKGWYRLA QDAINREGPF LEIACIPVAG LTVLLWPIVV IGFILVTIFS SIFVGLYGAV VVFQERSFRR GVSYVIAVVG EFDEYTNDWL 301: YLREGTIFPK PRYRMGRGSF SSEVSVIVHP SDVTRVNSSG SVDAPAMLVP SLVHSVSVRE AIQEVRMVQI WEHMMGWFEM QGKELLDAEV LTPTDLYESL 401: KGRHGNESSI INVGLPSYAL LHTLLSSIKA GVHGVLLLDG SEVTHLNRPQ DKFLDWVFNP IMVLKDQIRA LKLGESEVKY LEKVVLFGNH EQRMEAWDNH 501: SNPPQENLRT AQIQGISRRM MGMVRSVSKL PTYRRRFRQV VKALITYYSE KQGLNRTGSM SSGDFIEEG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)